| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0793 |
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| Symbol | |
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| ID | 4928716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 761592 |
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| End bp | 763313 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640166294 |
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| Product | DNA ligase I, ATP-dependent Dnl1 |
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| Protein accession | YP_001097318 |
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| Protein GI | 134045832 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.027506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTTA ATGATTTTTG TAAAATTCTT GATAAAATTG AAAAAACTAC GAAAAGGCTT
GAAAAAACAG ACTATTTTGT TGAATTAATC GATTTTATCA AAACTAATGG AAAACCTGAA
AATTTAAAAC AAGTATCACA AATTACAATT GGAAGAGTTT TTGCGGAATT TGAAAATAAA
GAAATCGGAA TTGGGCCAAA TTTATTACTT GAAGCAGTGA AAACCACAGG AATTTCTGAA
AAAGATTTAA AAGCAGAAAT TAAAAAGACT GGAGATATTG GAACTGCTGT TGAAAATTTA
AGTTCAAATA TAAAACAGGT GTCCTTATTC AGCCAGCCAC TAACTCTTGA AGAAATGTAC
TCCACATTAA AAAAACTCTC AGAAATTGAA GGAAATTCAT CTCAAAAAAA GAAAATAAGA
ATAATTTCAA ATCTACTAAT TTTAGCAAAT CCTGTTGAAT CAAGATATAT TTCAAGGCTT
ATTTTAGAAG ATATGAGAAT TGGAATGAAC ATTCCAACAA TTTTGGCCTC ATTTTCAAAT
TATTTCAATG TTAACAAGGA AAATGTCGAA AAAATATATG CTGTTACAAA CGATATCGGA
CTTTTGGGCG AAAAGTTGAT TTCTGGTTCA GACATTGAAA ACGATTCAGA ATTACATTTA
AAAGTATTCA GGCCAATAAA ACCGATGCTT GCACAGTTAA CCCCCTCAAT TGAAGATGCG
ATAATCGAAA CTAAAATACC CCAATTTGAA ACAAAATACG ATGGTGCAAG AGTTCAAGTG
CATAAATCAA ATGGCGAAGT AAAGATATAC AGTAGAAGGC TTGAAGACAT TACAAATTCA
GTTCCCGAAC TCGTTGAAGA GATTAAAAAA ATAGATATTG ACAACATCAT TTTAGAGGGG
GAATGTGTTG CAATGGACTT ATCTTCTGGA AAACCAAGGC CTTTTCAGGA CATTTTAAGA
AGGTTCAGGC GAAAGTACGA TATCAACAAA ATGGCGGAAA AAATAGCTTT AAGAATATAC
TTTTTCGATG TTTTATATTA CAACCGAGGT TTAATCGATA CCCCACTAAG AAATAGACGA
GAAATCTTAG AAAAATTATT TGGAACAAAT GATTGGGATA CTGAACTAGA AAAAATTGAA
AAAGAGATTT TGTCCAAAAA AATGCTGTTT TCGTCATTTA AATTAAATAG CGATGATCCA
AACCTTGCAA AAGAATTTTT TAACTGGAGT TTGAGTATTG GACATGAAGG GGTCATGATT
AAAAATCCTG ATGCACCATA TACACCAGGA AGTAGGGTTA AAACAATGTA TAAAGTTAAA
CCAACATTGG AAAATCTTGA TGTGGTTGTA ACTCGTGCAA AAATTGGAAT GGGAAAAAGA
AAAGACTGGT ATGGCTCATA TGAAATTTCT GTAAAAGATG ATGAAAGTAA TTTACACGTT
ATTGGAAACG TTGGAAGTGG GCTTACCGAG GACGATCTTG AAAGACTTAC AAAAATAGTT
AATGAAATAA AAATTGAAGA TTTAGGCGAA GAAGTAATTT TAGAACCTAA AATAGTACTT
GAAGTAACAT ATGAAGAAAT TCAAACCTCT GAAAAATACG AAATGGGTTA TGCCCTACGT
TTTCCAAGAG TTGTTCAGAT AAGGGAAGAC AAATCTATAA ATGACATTAA TACATTAGAT
GATGTGAAGA AAATATACGA TATAGAACGA AACAGAAAAT AA
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| Protein sequence | MLFNDFCKIL DKIEKTTKRL EKTDYFVELI DFIKTNGKPE NLKQVSQITI GRVFAEFENK
EIGIGPNLLL EAVKTTGISE KDLKAEIKKT GDIGTAVENL SSNIKQVSLF SQPLTLEEMY
STLKKLSEIE GNSSQKKKIR IISNLLILAN PVESRYISRL ILEDMRIGMN IPTILASFSN
YFNVNKENVE KIYAVTNDIG LLGEKLISGS DIENDSELHL KVFRPIKPML AQLTPSIEDA
IIETKIPQFE TKYDGARVQV HKSNGEVKIY SRRLEDITNS VPELVEEIKK IDIDNIILEG
ECVAMDLSSG KPRPFQDILR RFRRKYDINK MAEKIALRIY FFDVLYYNRG LIDTPLRNRR
EILEKLFGTN DWDTELEKIE KEILSKKMLF SSFKLNSDDP NLAKEFFNWS LSIGHEGVMI
KNPDAPYTPG SRVKTMYKVK PTLENLDVVV TRAKIGMGKR KDWYGSYEIS VKDDESNLHV
IGNVGSGLTE DDLERLTKIV NEIKIEDLGE EVILEPKIVL EVTYEEIQTS EKYEMGYALR
FPRVVQIRED KSINDINTLD DVKKIYDIER NRK
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