| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0724 |
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| Symbol | dapF |
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| ID | 4928508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 693519 |
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| End bp | 694352 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640166225 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001097249 |
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| Protein GI | 134045763 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase
[TIGR00654] phenazine biosynthesis protein PhzF family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0456566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTA CAAAAATGCA TGGTTTAGGC AACGATTATA TCTACGTAGA TGCAATTTCA
CAAAAAATTG AAAATCCTAA CGAAATTTCA AAATTCGTAA GCGACAGACA CTTTGGAATT
GGTTCAGATG GACTTGTATT AATTCTTCCA TCGGATGTCG CAGACTTTAA AATGAGAATG
TTTAATTCAG ATGGTTCAGA AGCTGAAATG TGTGGTAATG CCATTAGGTG TGTTGGAAAG
TTCGTTTATG ATAAAAAAAT GACTGATAAA TCCACAATTA GTATTGAAAC ACTTGCAGGA
ATAAAAGTTC TTGAAATGAC TGTTGAAAAC GGAAAAGTAG TTTTGGTAAA AGTTGATATG
GGTGAACCCA TTCTAAAAGC AGAAACAATT CCTGTTTTAA GTGAAAAACA TCCTGTAATC
GATGAAGAAA TTACTGCAAA AGATTACTGC TACAATTTTA CCTGTGTTTC AATGGGAAAC
CCTCATGCAA TAACATATAT TGAAAATGTG GAAGAATTCC CTCTTGAAAA AATCGGTCCG
TTATTTGAGG TTCACGAAAA ATTCCCAAAA AAAACAAACG TCGAATTTGT AGAATTAATC
GATGATTCTA CTGTTAAAAT GAGAGTTTGG GAAAGAGGTG CTGGTGAAAC ACTTGCGTGC
GGAACTGGAG CTTGCGCAGT TTTAACTGCA TCTGTTTTAA AAGGATACGT TGGTAGAAAA
GCAACAGTCA AACTTCTCGG TGGAGATTTA ATAATTGAAT GGAATGAAAA AGATAATCAC
ATCTACATGA CCGGTCCTGC AACAACAGTC TTTGAAGGAG AAATTGACAT TTAA
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| Protein sequence | MKFTKMHGLG NDYIYVDAIS QKIENPNEIS KFVSDRHFGI GSDGLVLILP SDVADFKMRM
FNSDGSEAEM CGNAIRCVGK FVYDKKMTDK STISIETLAG IKVLEMTVEN GKVVLVKVDM
GEPILKAETI PVLSEKHPVI DEEITAKDYC YNFTCVSMGN PHAITYIENV EEFPLEKIGP
LFEVHEKFPK KTNVEFVELI DDSTVKMRVW ERGAGETLAC GTGACAVLTA SVLKGYVGRK
ATVKLLGGDL IIEWNEKDNH IYMTGPATTV FEGEIDI
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