| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0619 |
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| Symbol | |
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| ID | 4928698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 587109 |
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| End bp | 590894 |
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| Gene Length | 3786 bp |
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| Protein Length | 1261 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 640166121 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001097146 |
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| Protein GI | 134045660 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4098] Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00025702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAGG ATCAAAACAA AGTAGCTACT GCAATAAGAT TAGTACCAAT AAATGGAAAA
TCAAAAGGAT ATGCATTCGA ATTAACAGGA GATAATAATT ATGATAAAAA TATCGATAAT
GTAATAACAA AAATATTAAA AAAAGACTTA ATAAGTAAAT ATAATTATTA TGTAGATATA
CATCCAATAA ATTTAGATTT TGTACCTCGA GATATACAAA AAAAAGATAA TTATTATTCA
AAAGCAAAAC AACATTATGA TAATACCAAC ATAATATATT TTGAAATAGA TGTTATTAAA
AAAGATAATA ATGCAGAAAA TACTTGTGAA TCATATCTCA ATAATTATTT AAAACATATG
CCAAAACCAT CAATGATTAT ATCAACAGGT AATGGATATC ATATATATTA TAAATTAGAT
GATTTTTACG AATGTACGGA ACTAAATAGC ATTCTTAAAA AATATGTAAA ATATGATAAA
CAACATAAAA AAATAATTAA TGGGGGTATA AAAAAATATG AAACAAACCC CAGATTAAGA
TTGCCTGGAA CATACAATAT TAAAAAAAAT GCGACAGAAA ATATTATAAA AAAAGAATGT
AGAATTATAG ATATAAATAA TAATATTTAT AATAAAGAAG AATTATTTTC AAATATTAAA
AATATTATTG AATTTGATGA TAATTATAAA ATAGATGAAG AATATACGAT AGATAAAAAA
ATAGCCACAA TTAATGATTA TGTAACAGCA ACAAAAAATG TGTGTGTATT TGGATCAACA
TATATGCGAG AAAAAATGCT TAAGCAAATA TTAGAATTAT GTAAAAAATA CCAGATGAAA
ATATCTGGTG GAAAAGATAA ATTAGAAAAT ATCTTAAAAA TGATAGGATA CGAGTATGAG
AATAAAGGAA ATCATTTTAA GATCGATAAT TATGGATTAG ATACAGAAGG TGGAGATCAA
GTACTGTTAA TATACCCAAA TGGATCTTTT GCAAAAACAT ACTGTAATTA TGTTGATGAT
CAATTAGAAA ACCCGTCATT TTTACAATTA TTATATGTTA GAGATATAGA TTCTTTTAAA
AAAATATTGG AAATAGAAGG GTTGTACAGT GAATTTTATA ATGATCTTAC AAAATTATAT
CACAACGAAA TACATGGAAT AAATATTCCA AAAGTAGTAT TTGATGAAAA TATAATAGAT
ATTGACCCAA ATATTTCAAA AAAAGACTTA ATTAAAATCA TTGATATGGC CAAAAAAAAT
TATAAATTAC CAAATACATA TATTACTAAA GATATGGAAA TTACAAAAGA AAGATATAAA
AATGCATATT TCCAACATTT AAATGAAGAA GAGTTTGAAG ATGTATATCA TAATATGTCG
GCATGTGTAA ATCAAGCATT ATCATACCAT ACAAATGATA TAGAATTATT AGAGATAGAT
CAATATATCC CAGTAGATAC AATAGATTAT ATTTTTAATA GAATTGATGA AAAATGCAAC
GGTAAACAAA AAGAAATTTG TATGTTATCG CCAACAGGAT CGGGAAAAAC AACAGCCATA
TTTAATAAAT TTATATCAAA TAATGAAAAT AAAACAATAT TGGCAGTACC ATATTTATCA
AATTCAAAGC AATTAGGGCT AAAATATAAA AATCAAAAAG GAATCGTTGC ATTGTATGAA
AATTCAAAAG TATCGCAAGA AAAATTGAAT AGTGCAAACT TTATCGTAAC CACATATGAT
CAAATCGGAA GACTTGCTGA AAGAAAAGAT ATTTCAGAGT TTAATTTATA CGTTGACGAA
GCACACAACG TAGTTTTACA GCATAATTTT AGAAATCAGG CTTTAGATGC ACTAAATAAG
GTAAGTAAAC TAGTAAATCG AACAATATAC GTTACTGCAA CGAACTACAA TTTAAACTAC
AAAAAATTGC CGATTATTAA AATAATTCAA AAAAATAAGA GATTCAAATA CGATGATATA
AGCGTAGTTG ATTCAAATGT GCCATTAAAA TTATTGATTG AAGCAGTGCT GTATGATTAC
GAAGATCAAA AAGAAAGTGG AAAAACACAG ATCATATTTA ATAATAACAA AGAACAGAAC
CGAAAAATAA AAGCCCGTTT AGAAGAACAA GGCATAATAT GTGCATTATT AGATGCAGAA
TCAAAAGAAT CAATAGAGTA TACAAACGTA ATGGAAGAAG AAAAACTGCC TGAAAATTTA
GATGTGTGCA TATGTACATC AGCAATTGCA GATGGGGTAA ATATTGAAAA TTTGAATATT
GGAAATATAC ATATTCATAA AATAGATAAT TATAATACAT TTTTGCAATT TATCGCAAGA
TTTAGGAATG GATGTCAAAA AATTTACCTG TATGTAGATT TAAATAAACA AAATCCAAAA
TATATTTCAA AAGAAAATTT TGAAAATGAT GTGCGAAAAA ATATATTAGA TATACTACAT
GTAATAAATT CAGATATTGC CAAATATTCT GATGAAAGAA TTAGAGAATT AGTATTAAAG
ATACATAATA GTGTATCAGA AACTCCTGAA ATATTATCTA CAATTGAAGA ATATACATTA
TCAGATATTA AAAAATATCA CTTAAAAAGT TTAGAACAAT TATTATCAAT ATATCCAGAA
GCATATGATG ATTGTGTAGA TATAGCAGAT ATTAATGAAA TATTGGCATT GAAAACAGGC
TATGGCTCTG AGGATAAATT ATTAACATAT GATTTAGATG CAAAAAAATA TGTTGTAAAT
GAAATTGCAG TAATGAAAAA ATATTCAGAT TATATAAGTA AACAGGTTAT GAATTCAAAA
ATCATGCTAC ATATGATGAT AAATAGATGT GATGATTTAG AAAAAAACGT GAATATTGTA
AATGAAAAAG AATATACAAA AGATGAAAAA TCCGAATTTA CAACACATAT CAACAACAGA
CGACACATAT ATTTTGAACT TGAAAAAGCA TATGAAAAAG ACGGAACTGC ATTAAAAAGA
ATTGCATACG AAGATGATAA AACAGTACGA GAAGTAATGT TAAGAAAGAA TATTTCACAA
GAATCCGTAA AATTAGCAAA TAAAAAATCA GAAACTATAA AATATGTCAC CATAATAAAT
GCAGAAGATG AAGGAATATT GGAGCCTGAA AAGAGACAAG AAAATTACAA TAAAGGAAAT
CGAGGATGGC ATAAATTAAC GGAAAATATA CGATTAATTA AAAATTTAAG TGTATTTAAA
AATAGTTCAA AACATATAAA AAATCTACAT AAAGTATGCT CTAACAATGC ACGGGCATAT
ACAAATTACA TATTGTACAC AATTTACGAA AATATTGTGA ATAGTGAAAA CGGAAAAAAA
GTAGATTTTT TAAAAATTAG GGATAGATTA AATAGTGAAT TTGAAAAAGT AGATGAATTT
GATCAAATAA GCATAGATAA AATTAAAGAA TATGCAAAAC AATTTGGAAA CATCGCAAGA
TGGGACGATA AAAAAGGAAT TGGATATTTC AAGAGTATGA ATGAAGTAAT ATTCAAAGTC
GTTAAATCAA AACAACAATT AAAAGACAAA TTAAAAGAAT ATACAACACC TGAAAAAGCA
ATAAATGAAA CTTTAGAGAA ATTAGGCGGG AAAGCAAAAA CAAACCAAAT TTTAAGATAT
ATTAAAGACA ATTATATTGG AATAGATAAC GATCATATCG AGTCAATAAA ACTCGTATTG
GATTCAGGTA TATTTATAAA ATTATCATCA GATGTAATAA TTTCATATCA GTCTGCAATG
GCATAA
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| Protein sequence | MFKDQNKVAT AIRLVPINGK SKGYAFELTG DNNYDKNIDN VITKILKKDL ISKYNYYVDI
HPINLDFVPR DIQKKDNYYS KAKQHYDNTN IIYFEIDVIK KDNNAENTCE SYLNNYLKHM
PKPSMIISTG NGYHIYYKLD DFYECTELNS ILKKYVKYDK QHKKIINGGI KKYETNPRLR
LPGTYNIKKN ATENIIKKEC RIIDINNNIY NKEELFSNIK NIIEFDDNYK IDEEYTIDKK
IATINDYVTA TKNVCVFGST YMREKMLKQI LELCKKYQMK ISGGKDKLEN ILKMIGYEYE
NKGNHFKIDN YGLDTEGGDQ VLLIYPNGSF AKTYCNYVDD QLENPSFLQL LYVRDIDSFK
KILEIEGLYS EFYNDLTKLY HNEIHGINIP KVVFDENIID IDPNISKKDL IKIIDMAKKN
YKLPNTYITK DMEITKERYK NAYFQHLNEE EFEDVYHNMS ACVNQALSYH TNDIELLEID
QYIPVDTIDY IFNRIDEKCN GKQKEICMLS PTGSGKTTAI FNKFISNNEN KTILAVPYLS
NSKQLGLKYK NQKGIVALYE NSKVSQEKLN SANFIVTTYD QIGRLAERKD ISEFNLYVDE
AHNVVLQHNF RNQALDALNK VSKLVNRTIY VTATNYNLNY KKLPIIKIIQ KNKRFKYDDI
SVVDSNVPLK LLIEAVLYDY EDQKESGKTQ IIFNNNKEQN RKIKARLEEQ GIICALLDAE
SKESIEYTNV MEEEKLPENL DVCICTSAIA DGVNIENLNI GNIHIHKIDN YNTFLQFIAR
FRNGCQKIYL YVDLNKQNPK YISKENFEND VRKNILDILH VINSDIAKYS DERIRELVLK
IHNSVSETPE ILSTIEEYTL SDIKKYHLKS LEQLLSIYPE AYDDCVDIAD INEILALKTG
YGSEDKLLTY DLDAKKYVVN EIAVMKKYSD YISKQVMNSK IMLHMMINRC DDLEKNVNIV
NEKEYTKDEK SEFTTHINNR RHIYFELEKA YEKDGTALKR IAYEDDKTVR EVMLRKNISQ
ESVKLANKKS ETIKYVTIIN AEDEGILEPE KRQENYNKGN RGWHKLTENI RLIKNLSVFK
NSSKHIKNLH KVCSNNARAY TNYILYTIYE NIVNSENGKK VDFLKIRDRL NSEFEKVDEF
DQISIDKIKE YAKQFGNIAR WDDKKGIGYF KSMNEVIFKV VKSKQQLKDK LKEYTTPEKA
INETLEKLGG KAKTNQILRY IKDNYIGIDN DHIESIKLVL DSGIFIKLSS DVIISYQSAM
A
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