| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0615 |
|---|
| Symbol | |
|---|
| ID | 4928365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 580148 |
|---|
| End bp | 581401 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640166117 |
|---|
| Product | restriction modification system DNA specificity subunit |
|---|
| Protein accession | YP_001097142 |
|---|
| Protein GI | 134045656 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0545068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAAG TAGCAGAAGG ATACAAAGAA ACCAAAATTG GAGTAATTCC CGAAGATTGG
CAGGCCGTTA AACTTTCAGA ATCAGTTAAT TTATTTGGAG GTTTTGCGTT TTCGAGTGAA
GATTCTAAAT CAGAAGGGGT AAAATGGTTA AAAATTGCAA ATGTGGGCAT CGATAAAATT
ACCTGGGAAA ATGAATCGTA TTTGCCTTTT GAATATTTGG AAAAATATTC CAATTATGCA
TTATCTAAAA ATGATATAGT TATGGCACTT ACTCGCCCGA TTTTAAATTC AAAACTTAAA
ATTTCAAAAA TTACCGATTT GGATATACCT TGTTTATTAA ATCAAAGAGT GGGGAAATTG
GATCCCAAAC AAAATACTTT TGGGGATTAT ATATACCATA GTTGTAAAAT GCCTATGTTT
ATACATTCAA TGAATGTTGC AATGGCAGGT ACGGATCCCC CAAATATTGG TTTTAGGGAT
TTATCCAAGA TACAAATACC GCTCCCACCA CTCCCCGAAC AGCAAAAAAT CGCTGAAATT
TTATCAACAT GGGATAATTC AATTGAAAAT TTAGAAAATT TAATTTCTAA AAAAATTGAA
ATTAAAAAAG GACTCATGCA AAATTTATTG ACAGGAAATG TTAGGTTTCC GGGCTTTGAA
GATGAATGGA AGGAAGTTAA AATTGGATCG TTACTGAATG AAGTTAAACG GAAAATCGAA
TGGGACGATT CAAAACTATA CGATTTGGTA AGTTTAAAAA GACGATCCGG CGGAATTTTC
TATCGAGAAT CATTATATGG TCATCAAATA CTTACTAAAA CATTACAACC AATAAAAGAA
GATGATTTTT TAATATCAAA AATGCAAGTT TTGCATGGCG CATTAGGAGC CGTATCAAAA
GAATTTGAAG ATATGTATGT TTCAAGTTCT TATGCAATAT TTAATTCGAA AACGCCAGAA
AAATTTAACA TTAAGTTTTT CGACTGGCTT TCGAAAACTC CGATAATGTA TCATTATGCA
TATATTTCCA GCTATGGAGT ACATATTGAA AAAATGACAT TTAATTTGAA ATTATATCTC
AAAGAAAAGG TAATGGTTCC AAATTCTATC GAAGAACAAG AATCGATTGT ACGGGTTTTA
TCAACACAAG ACAAAGAAAT TGAACTTTTA AAACAGAAAT TGGAACTTGT AAAAACCCAG
AAAAAAGGTT TAATGCAAAA TTTATTGACT GGAAAGGTGA GGGTAAATGT TTAA
|
|---|
| Protein sequence | MEEVAEGYKE TKIGVIPEDW QAVKLSESVN LFGGFAFSSE DSKSEGVKWL KIANVGIDKI
TWENESYLPF EYLEKYSNYA LSKNDIVMAL TRPILNSKLK ISKITDLDIP CLLNQRVGKL
DPKQNTFGDY IYHSCKMPMF IHSMNVAMAG TDPPNIGFRD LSKIQIPLPP LPEQQKIAEI
LSTWDNSIEN LENLISKKIE IKKGLMQNLL TGNVRFPGFE DEWKEVKIGS LLNEVKRKIE
WDDSKLYDLV SLKRRSGGIF YRESLYGHQI LTKTLQPIKE DDFLISKMQV LHGALGAVSK
EFEDMYVSSS YAIFNSKTPE KFNIKFFDWL SKTPIMYHYA YISSYGVHIE KMTFNLKLYL
KEKVMVPNSI EEQESIVRVL STQDKEIELL KQKLELVKTQ KKGLMQNLLT GKVRVNV
|
|---|
| |