| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0584 |
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| Symbol | |
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| ID | 4929296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 548429 |
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| End bp | 549325 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640166088 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001097113 |
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| Protein GI | 134045627 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.460121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGCC AAAAAAAGAT TTTAAAAGTA ACAATTGATT CAAAAATTGC TGGAAACAAG
TTAATCGATG TTTTAAAGGA CGATTTTGAA CTTTCCAATA AAATGATAAA AAAGTTCGAT
AAAGAAAAGA AAATCTTTGT AAATTCTAAA AATATTTCCT TAAAATCAAA ATTAAAAGAA
AACGAAACCG TTTCTGTTGA AATCGATTGC GGAATTAATA ATATTGATCC TGAAAAACTG
CTATTATGCG TAATTTACGA AGACGACGAT TTATTGATTG TTGATAAACC AAAAAACATG
GTTGTCCACC CAACTAAAAA TGTACTATCT GGAACACTTG CAAATGCAAT TTCAAATCAC
CAGAAAATAA ATAATCAAAA CTACAAAATA AGATTTGTAA ACCGTCTTGA TATGGATACC
ACGGGACTTT TAATCATTGC AAAAAATTCT TATTCTCATC AACAGTTAGC AAAACAGATG
GATGAAGGAA TTTTAGAAAA AATATATATT GTGGTAGTAA ATGGCCATCT GGATTCAAAA
GAAGGGGTTA TTGAAGATTC AATCGATTTA AATGACGATG GTATAAAGAG AGAATTATCT
ACTTTTGGAA AAATTTCTAA AACTAAATAC AAAGTAATTG AAGAATTCAA TAATGTATCA
GTTCTTGAAA TAAAATTGTT AACAGGTAGA ACACACCAGA TACGGGTTCA TTTATCAAGT
TTTGGAAATA ATATAATTGG AGATACTCTT TATGGAAAAA CTGCTGATTT AATCGAGAGA
CAAGCTCTTC ATTCGCATAT TTTAAGATTT ATTCATCCAA TAACAAAAGA AAATATGGAA
ATTAGATCAA AACTGCCAGA TGATATGGAA AATCTCATAA AAAACTTGAA AAACTAA
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| Protein sequence | MESQKKILKV TIDSKIAGNK LIDVLKDDFE LSNKMIKKFD KEKKIFVNSK NISLKSKLKE
NETVSVEIDC GINNIDPEKL LLCVIYEDDD LLIVDKPKNM VVHPTKNVLS GTLANAISNH
QKINNQNYKI RFVNRLDMDT TGLLIIAKNS YSHQQLAKQM DEGILEKIYI VVVNGHLDSK
EGVIEDSIDL NDDGIKRELS TFGKISKTKY KVIEEFNNVS VLEIKLLTGR THQIRVHLSS
FGNNIIGDTL YGKTADLIER QALHSHILRF IHPITKENME IRSKLPDDME NLIKNLKN
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