Gene MmarC5_0571 details

Gene Information

• Locus tag: MmarC5_0571
• ID: 4928007
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 530738
• End bp: 531340
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640166075
• Product: TetR family transcriptional regulator
• Protein accession: YP_001097100
• Protein GI: 134045614
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.530829
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACAA AAGAAAAAAT AGTGCAAAAT GCAGCAAAGC TTTTTCTTAC AAAAGGCTAC 
AATCAAACGT CTTTAAACGA AATAGCCGAA AAAACGGGTA TTACGAAGGG TGGTATTTAC 
CATCATTTTA AAGACAAAAA TGAACTTTTT GTAGAAATGG CTGAAGCTTT CAAATCTAAA 
TTTATGACAC TTGTGTCAAA AATGGAGCAA GAAACTTCTT TAGAAAATTT ATTGAAGAAT 
TATTTTGAAA ATTCTGAAAT ATTGATACAT GAAATGGCTG AATATCTTGA ATTTAATATG 
GAAGATATTA AGTATTTTTC AGAATTTCAA TCGAGATTTA CATTAGACGC AATCCAATAC 
GGTCCAAAAG ACATGGATTT TACAATGACT ACTAAAATGA TGTATTCAAT TCTGAAAAAA 
AAGATAGAAC TCGCCAAAAA AAATGGGGAG ATATTGGAAG ATATCGATTC AAAAGAACTT 
TCATTAGAGA TTATTGCAAT CATTGAAGGT TATTCAAATT TAAGACGATT AAAATTAATG 
AATGACTCTT ATGACTACGG AAATAGGTGT CTTGAACGAT TGTGGAATCG AATAAAAAAA 
TAA 

 

Protein sequence

MSTKEKIVQN AAKLFLTKGY NQTSLNEIAE KTGITKGGIY HHFKDKNELF VEMAEAFKSK 
FMTLVSKMEQ ETSLENLLKN YFENSEILIH EMAEYLEFNM EDIKYFSEFQ SRFTLDAIQY 
GPKDMDFTMT TKMMYSILKK KIELAKKNGE ILEDIDSKEL SLEIIAIIEG YSNLRRLKLM 
NDSYDYGNRC LERLWNRIKK