| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0501 |
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| Symbol | |
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| ID | 4928777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 458456 |
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| End bp | 459448 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640166004 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001097030 |
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| Protein GI | 134045544 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.153832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA CTTTTGATGA ACTTATGAAA TTTTACGAAA ATAAAAAAAT ACTGGTTACA
GGAGGTACGG GATCAATAGG AAGCACGTTA GTGAAATCTC TATTAAAATT AAATCCTGAT
ACCGTACGAA TTTTTGATAT TAATGAAACT GCACTGTTTG ATTTAGAACA TGAATTAAAT
GATAACAGAA TACGATGCCT CATTGGGGAC GTTAGGGATA AAGAGAGGGT ATATCGTGCC
GTTGAAGATA TTGACATAGT TTTTCACGCG GCTGCATTGA AACACGTTCC CCTCTGTGAA
TATAATCCTT TTGAAGCCGT AAAAACCAAT GTTTTGGGAA CTCAGAATTT AATAGATGCC
GCAATTGATG AAAATATTGA AAAATTCATA ACCATAAGTA CAGATAAGGC AGTAAATCCA
GTAAATGTAA TGGGTGCAAC AAAATTACTG TCTGAAAGAT TAACACTCTC TGCAAATCTC
TACAAAGGTA GTAGAACAAC AGTATTCTCG GCAGTTAGAT TTGGAAATGT ACTAAACTCA
AGGGGTTCAA TAATCCCATT AATAAAAGGG CAAATACGTA AAGGTGGCCC CGTTACATTG
ACTGATTCAG AAATGACCCG ATTTGTAATG AAAATAGATC AGGCAGTGCA CTTAGTATTA
AAGGCAGGGC TTTTGGCCCA AGATGGAGAA ATATTTGTTT TGAAAATGCC TTCTGTTAAA
ATTATTGATT TAATAGAATT TTTAATTGAA AAATATGCCC CGGAACATAA TTATCAGAAA
GAAGATATTG AAATCAAAAA TATAGGAAAA AGAGCGGGCG AAAAGTTATA TGAAGAACTT
TTAATGGATG AAGAATGTTC TAAACTCGAA GAAACGGATG AAATGTATAT AATTAAACCT
TTTAAAAGTG AAAAATCTGA AAATGTAAAA AAAGTGTACA ATTCCGAAAA TGTAGGTTAT
TTAAGAAAAG AAGACCTTGA AAAATTACTT TAA
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| Protein sequence | MEKTFDELMK FYENKKILVT GGTGSIGSTL VKSLLKLNPD TVRIFDINET ALFDLEHELN
DNRIRCLIGD VRDKERVYRA VEDIDIVFHA AALKHVPLCE YNPFEAVKTN VLGTQNLIDA
AIDENIEKFI TISTDKAVNP VNVMGATKLL SERLTLSANL YKGSRTTVFS AVRFGNVLNS
RGSIIPLIKG QIRKGGPVTL TDSEMTRFVM KIDQAVHLVL KAGLLAQDGE IFVLKMPSVK
IIDLIEFLIE KYAPEHNYQK EDIEIKNIGK RAGEKLYEEL LMDEECSKLE ETDEMYIIKP
FKSEKSENVK KVYNSENVGY LRKEDLEKLL
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