| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0483 |
|---|
| Symbol | |
|---|
| ID | 4927533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 438287 |
|---|
| End bp | 439474 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640165986 |
|---|
| Product | acetylornithine aminotransferase |
|---|
| Protein accession | YP_001097012 |
|---|
| Protein GI | 134045526 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR01885] ornithine aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTT TAGAAAAAGA ACAAATTATT TTGGATGAGA AAAAATACGT TATAAATACT
TACGGCCGAG TTCCAGTCGT CCTTGTAAAA GGAAAAGGAA TGAGCGTATT TGATACTGAA
GGAAAAGAAT ATTTTGATTT TCTTGCAGGA ATTGGGGTAA ATAACGTCGG GCACTGCCAC
CCCAAGGTTG TTGAAACAAT TAAAAATCAG GCACAAACCT TAATCCACAT TTCAAATATA
TATTACAATG TTCCACAGAT CGAGTTAGCA AAAAAACTCG TAAATTTAAG CGGATTAGAT
AAAGCATTTT TCTGTAATAG CGGTGCAGAA GCAAACGAAG CTGCAATAAA GCTTGCAAGA
AAATACGGTA AAAAAAAAGG TAAAGAGGGG GAAATTATTA CAATGGAACA CGCTTTCCAC
GGTAGAACCC TTACAACAGT TACTGCAACT CCTAAAGCAA AATATCAGGA AGGGTTTGAA
CCATTACCAC AAGGTTTTAA TTACATTCCC TTCAACGATA TCGAAGCATT GAACGCAGGA
ATTTCAGAAA AAACAGCTGC AATAATGATT GAACCAGTTC AGGGGGAAGG TGGAATCCAC
CCTGCAGACA AGGAATATTT AAAAGCAGTT CGAAAATTAT GCGATGAAAA TAATATCGTT
TTAATTTTTG ATGAAGTACA GTGTGGAATG GGAAGAACTG GAACTATGTT TTCCTATGAA
CAGTACGGGG TAGTTCCTGA CATTGTAACG CTTGCAAAAG GGCTTGGTGG AGGATTCCCA
ATTGGTGCAA TGGTTGCAAA AAGCGAAATT GCAGATGCAT TTACCCCTGG AAGCCACGGA
ACCACATTTG GTGGAAATCC GCTTGCATGT GCTTCATCTA ACGCTGCAAT TGATGTAATT
TCAGGACTTT TAGAAAATAC GCTTGAAATG GGGGAATACT TTAGATCTGA ATTAAAAAAA
TTGGAAGAAA AATATGATTT CATAAAAGAA GTCAGGTCGT TAGGATTAAT GGTTGGGGTG
GAATTAACAT TCAATGGATC AGATATAGTT TCGAAAATGT TCGAAAAAGG ATTTTTAATA
AACTGCACTT CTGATACAGT TTTGAGGTTT TTACCTCCGT TAATCGTTGA AAAAGAACAC
ATCGATTCAA TAATTTCGGC TCTTGACGAA GTATTTTCCG AAATTTAA
|
|---|
| Protein sequence | MSTLEKEQII LDEKKYVINT YGRVPVVLVK GKGMSVFDTE GKEYFDFLAG IGVNNVGHCH
PKVVETIKNQ AQTLIHISNI YYNVPQIELA KKLVNLSGLD KAFFCNSGAE ANEAAIKLAR
KYGKKKGKEG EIITMEHAFH GRTLTTVTAT PKAKYQEGFE PLPQGFNYIP FNDIEALNAG
ISEKTAAIMI EPVQGEGGIH PADKEYLKAV RKLCDENNIV LIFDEVQCGM GRTGTMFSYE
QYGVVPDIVT LAKGLGGGFP IGAMVAKSEI ADAFTPGSHG TTFGGNPLAC ASSNAAIDVI
SGLLENTLEM GEYFRSELKK LEEKYDFIKE VRSLGLMVGV ELTFNGSDIV SKMFEKGFLI
NCTSDTVLRF LPPLIVEKEH IDSIISALDE VFSEI
|
|---|
| |