| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0446 |
|---|
| Symbol | thiE |
|---|
| ID | 4928433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 404774 |
|---|
| End bp | 405397 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640165950 |
|---|
| Product | thiamine-phosphate pyrophosphorylase |
|---|
| Protein accession | YP_001096976 |
|---|
| Protein GI | 134045490 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAATTTA AGGATAAATT AAAATTTTAC GTAATAACTG ACAGTAATTA TTCAGATGAA
GTTAGTTCTG TTGAAAAAGC TCTGAAAGGA GGTGCTTCAT CCATTCAACT TCGAATGAAA
ACTTCAAGTA CTCGTAAAAT GATTGAAGTT GGAAATAAAC TCAGAACATT AACGTCTGAA
TATGATGCCT TGTTTTTTGT AAACGACAGG CTCGATGTAG CGCAGGCCGT AAATGCGGAT
GGAATTCATG TTGGAATTGA TGATATGCCT GTTTCAAAAA TTAAAGAAAT TGCACCTAAT
TTAATAATCG GAGCATCTGC ATACAACATT GATGAAATGA AAACTGCAGA ATATGAAGGT
GCTGATTACT TAGGTGTTGG TGCGGTTTAT TCCACAAATA CAAAACTTGA TGCGAGAAAT
CTTGGACTTG ATGGGTTAAA AGATATTTCA AAAATTGCAA ATCTTCCAAT TGTTGCAATT
GGTGGTATTA ACCATTCAAA TGTTGAAAAT GTATTGGAAT GCGGAGTATC GGGTGTTGCA
GTTGTATCTG CAATCGTTGG TGCAGAAAAT ATCTTAAAAT CCGCTGAAAA CATGCATGAA
CTAATTAAAA AATATATAAA ATAA
|
|---|
| Protein sequence | MKFKDKLKFY VITDSNYSDE VSSVEKALKG GASSIQLRMK TSSTRKMIEV GNKLRTLTSE
YDALFFVNDR LDVAQAVNAD GIHVGIDDMP VSKIKEIAPN LIIGASAYNI DEMKTAEYEG
ADYLGVGAVY STNTKLDARN LGLDGLKDIS KIANLPIVAI GGINHSNVEN VLECGVSGVA
VVSAIVGAEN ILKSAENMHE LIKKYIK
|
|---|
| |