| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0408 |
|---|
| Symbol | |
|---|
| ID | 4928157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 372338 |
|---|
| End bp | 373384 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640165912 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_001096938 |
|---|
| Protein GI | 134045452 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.586002 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAGTT CTGTTAATGA CTACAAAAAA TATACTTTAA AAAAACTGAT ATTTGGTTTT
TTACTGATTA TAGCTTTAAT CGTAATAGCA GTTTATGCAC TATGCACTGG AGATTTCCAT
TTATCAATCA ATCAAATCAT AAATGCATTG CTTGGTTCAG GAGATGCTGC TTCAAACCTC
GTTATATGGA ACATTAGACT TCCAAGAATA TTTGCTGCAG TACTCTGCGG AATCGGACTA
TCGGTTTCAG GTGCAGTAAT GCAATGTGTT TTGAGAAACC CGCTTGCATC CCCATTTACC
ATGGGTATTT CTCACGGAGC TATGTTTGGT GCATGCGTTG CAATAATTAC CCTTGGAATT
GGTGGTGCTG AAAGTACCGG CCATATCGCA ATAAACAATC CATATTCAAT AACCGTATTT
GCATTCTTTG GTTCATTGCT TGGCGTTTGT GCAGTATTAC TACTTGCAAG ATTAAAGGGA
TTAAGTCCCG AAGCAATGAT TCTTGCAGGG GTTGCAATAT CTTCACTATT TACTGCTGCA
ACCACACTTA TACAGTACTT TGCAGATGAT ATGCAGTTAG CTGCAATGGT TTATTGGTCA
TTTGGTGACC TTGGAAGACC ACTCTGGCCA GAAGTAAAAA TTATGGCGTT TGTAGCCGCT
GTTTCACTTA TTTACTTCAT ACATAAAAGA TGGGACTATA ACGCTCTTGA AAGCGGTGAG
GAAACTGCAA AATCCCTTGG TGTTAACACA GATAAAATAA GATTATCCGG AATGCTTGTT
GCATCCCTCG TAACTTCCGT TTGCGTTGCA TTTTTGGGAA TTATTGGATT TGTTGGATTA
ATATGTCCCC ACATTGTAAG AATAACTGTC GGTGGAGATT ACAGATACTT AATTCCATTG
TGCAGTATAT TCGGTGCAGT ATTGGTACTT TTAGCAGATA CAATTGCAAG AACAATAATT
TCTCCAATAA TTCTCCCAGT AGGAATATTA ACATCATTTT TAGGGGCTCC GATGTTCCTT
TACTTACTAA TGAAGATGTA TAAATGA
|
|---|
| Protein sequence | MESSVNDYKK YTLKKLIFGF LLIIALIVIA VYALCTGDFH LSINQIINAL LGSGDAASNL
VIWNIRLPRI FAAVLCGIGL SVSGAVMQCV LRNPLASPFT MGISHGAMFG ACVAIITLGI
GGAESTGHIA INNPYSITVF AFFGSLLGVC AVLLLARLKG LSPEAMILAG VAISSLFTAA
TTLIQYFADD MQLAAMVYWS FGDLGRPLWP EVKIMAFVAA VSLIYFIHKR WDYNALESGE
ETAKSLGVNT DKIRLSGMLV ASLVTSVCVA FLGIIGFVGL ICPHIVRITV GGDYRYLIPL
CSIFGAVLVL LADTIARTII SPIILPVGIL TSFLGAPMFL YLLMKMYK
|
|---|
| |