Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0392 |
Symbol | |
ID | 4928023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 353478 |
End bp | 354242 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640165897 |
Product | ABC transporter related |
Protein accession | YP_001096923 |
Protein GI | 134045437 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.238571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGTTC TAGAACTTAA AAATCTTATC AAAAAATTTG GAAACAGTAA AAAAGACCTT GTTGCAGTTG ATAATGTAGA TTTATCTGTA CAACATAACG AATTTGTATC AATTGTTGGC CCCAGCGGCT GTGGAAAATC CACAATCTTA AGAATGATTG CAGGACTTGA AAATCCAACA TCCGGAGGAA TTTACCTCGA TAAAAAGGAC GTTTTAGGCC CTGATGCAGA TAGAGGAATG GTATTTCAAC AGTACACCCT TCTTCCTTGG AAAACAGTTC TTCAAAATGT TACTTTTGGA CTTGAAATTA AAAACGTTCC AAAGGAAGAA AGAATTGAAA TTGCTAAAAA ATTTATAAAA ATGGTTGGAC TTGAAGAATT TTGCGATTCT TACCCTTACG AATTAAGTGG CGGAATGCAA CAAAGAGTTG CAATTGCTAG AACTCTTGCA AATGACCCCA AAATTGTACT GATGGATGAG CCATTTGGAG CCCTCGATAC ACAGACAAGA GCAGTGTTAC AGGATCACCT CTTAAAAATA TGGGAAAGTG AAAAAAAGAC CGTTGTTTTT GTAACGCACA GTGTTGATGA AGCAGTTTAT CTGTCAGACC GTGTTGTTGT CATGACTGCA CGACCTGGAA AAATAAAATG CATTATTGAT ATAGATTTGG GCCGACCAAG AAAAAGAACA AGTGTCGAGT TCTTAGAATA CAAGAAAAAA ATAATTGACG AGTTAAAATC CGAAGTTTTA AAAACTTACG TATAA
|
Protein sequence | MSVLELKNLI KKFGNSKKDL VAVDNVDLSV QHNEFVSIVG PSGCGKSTIL RMIAGLENPT SGGIYLDKKD VLGPDADRGM VFQQYTLLPW KTVLQNVTFG LEIKNVPKEE RIEIAKKFIK MVGLEEFCDS YPYELSGGMQ QRVAIARTLA NDPKIVLMDE PFGALDTQTR AVLQDHLLKI WESEKKTVVF VTHSVDEAVY LSDRVVVMTA RPGKIKCIID IDLGRPRKRT SVEFLEYKKK IIDELKSEVL KTYV
|
| |