| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0288 |
|---|
| Symbol | |
|---|
| ID | 4927923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 247401 |
|---|
| End bp | 248804 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640165790 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001096819 |
|---|
| Protein GI | 134045333 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3287] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAATTTA TCGAATTCGG GTATGGTACT TCAACAGATA AAAATTCTTT AAAGGCTGGT
GCACATGCTG CATCCGATGC TTTGAAAATG ATGAAAAAGT ATTCGGAAAA GCCCAATATT
GTATTTTTGT ATTCTTCTCC AGATTACGAT CCTGAAGAAG TGCTTAATGG TGTTAAATTA
ATACTTGGAA ATACTGTCCA GATAGTTGGT GGAAGTTCAA AATTTCAAGT TTGTGGAAAT
AAATTTTTAG AAAACGGCGT TTCAATTGGA ATTTTGGGTT CAAAATACTT CAGTACTGGA
ATGGGGGTTG GACTTGGAAT TTCGATAAAT CCAAAAGAAT CTGGAAAAAA AGCAGTTAAA
GATGCAGTTG AAAACCTCGG AATGCTTCCA AAGCTGCTTT ATGTAATAAT GGATTTTTGC
AAATGCGAAG AACAGGTTTT AAAAGGAGTT GTTGAAGAAC TCGGTGTCAC GATACCTGTT
TTTGGAGGAG TTTCTTCAGA TAATTTCGAA TTTGAACATA CATACCAATA TGGAAACGAT
GTTTATCTAG ACAGTATCGT TTGTGTCGCA TTTGGCGGAG ATATAGTGCC CAAAATTTCA
TATAATAACT ACGAGTATAA CGAAAATCAG GGAAAATTAG AAAATTTAAT TACTAAATCA
GAAAAACGTT CCATTGAAGA AATAGGCAAG GTTTCGGCAG TAAAAAGATA TATTGAAATT
TCAGGATACG AAGGTTCTGA AAAAGAGCTT GAAAAAGATC CAGAATTTTA TTTATCTCAT
CCATTAGGTA TTTTAGATAC AGCAGGAGAT ATCCACTTTA AAGGTCCGAT AGCAATTAAA
AACAAGAAAT TAATTACTGG ATCGAATATA AGCAATTCAA ATGAATTGAA AATAGAAAAT
ATTGATAAAA ACGAGTTAAA ACATATATTT GAAACGAATA CTAATGTTTT AAAAAATACT
CAACCACATT ACGATCCTGC ATTCACATTT TGCAATATTT CATCATTCTT GTCAGAGATT
GATCCTGAAA AAATTGGAAA ACTAATTGAA AATTCAGACG TAAATCCATT TTTTGGAAGT
TCAACGTTTG GAGAAATTTC TTTTAGAAAA TACGGAAACT ATTCAATGAG CATGTGTTCT
TTTGCACCAG ATTTAGTTAC AATAAGTGCT AAAGAAGGAA TTCACATGTT TACAAAACAC
CCTGCAACAA AAGAAACACT TTTAAAAATC CATGAGCTTG GAGGTTCCGT AAAAGTTGAA
GAACTTGCAA AAGCGCTTGG AATTCATAGA AGATCCGCAT ACGATAGGAT CGATCCGCTC
TTAAAATATG GATTTATCGA AAAAGATCAG GCAGTTATTA CTATAACAGA TTTTGGAAAA
CTACTGCTTA AATTCGAATT TTAA
|
|---|
| Protein sequence | MEFIEFGYGT STDKNSLKAG AHAASDALKM MKKYSEKPNI VFLYSSPDYD PEEVLNGVKL
ILGNTVQIVG GSSKFQVCGN KFLENGVSIG ILGSKYFSTG MGVGLGISIN PKESGKKAVK
DAVENLGMLP KLLYVIMDFC KCEEQVLKGV VEELGVTIPV FGGVSSDNFE FEHTYQYGND
VYLDSIVCVA FGGDIVPKIS YNNYEYNENQ GKLENLITKS EKRSIEEIGK VSAVKRYIEI
SGYEGSEKEL EKDPEFYLSH PLGILDTAGD IHFKGPIAIK NKKLITGSNI SNSNELKIEN
IDKNELKHIF ETNTNVLKNT QPHYDPAFTF CNISSFLSEI DPEKIGKLIE NSDVNPFFGS
STFGEISFRK YGNYSMSMCS FAPDLVTISA KEGIHMFTKH PATKETLLKI HELGGSVKVE
ELAKALGIHR RSAYDRIDPL LKYGFIEKDQ AVITITDFGK LLLKFEF
|
|---|
| |