| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0216 |
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| Symbol | |
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| ID | 4928603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 185535 |
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| End bp | 187370 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640165715 |
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| Product | DNA-directed RNA polymerase subunit B' |
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| Protein accession | YP_001096747 |
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| Protein GI | 134045261 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAAAAC AGACAAATGT ATATGTTAAC GGGAAATTGA TCGATACCAC AGAAGACCCT
GAAACACTTG TTAAAAACTT AAGGGAAAAC AGGAGAAGTG GAAAATTATC ACCAAGTACG
TCAATTTCAT TCAATGAAGA GAGCAACGAT GTACACATTT CGACCGATGG TGGAAGGGCT
GTAAGACCAT TAGTTGTAGT TGAAAACGGT GCTTCAAAAT TAACACAAGA ATTACTCGAA
AAAGTAGATG CTCAAGAATT AACTTTTCAT GAACTAGTTG ATTCAGGTGT TATTGAATAC
TTAGATGCTG AAGAAGAAGA AAACGCAAGA ATTGCGATGT ACGAAGATGA AATAACTGAG
GAAAACACTC ACATTGAAAT CGACCCTCTT GTTATTTTAG GTATCGGTGC AGGTGTTGCT
CCATACCCAG AACACAATTC AGCTCCAAGG ATTACGATGG CTGCTGCGAT GAGTAAACAG
TCACTTGGAA TTCCTATGGC AAACATAAAA TGGAGAATGG ATACAAGAGG ACACTTACTC
CACTACCCAC AAGTTCCTCT TGTAAGAACA AAACACCAGG AAATCTTAGG ATTTGACAAA
AGACCTGCTG GACAGAATTT CGTTGTAGCA GTTATGAGTT ACGAAGGCTA CAACATGGAG
GATGCGTTCA TTATCAACAA AGCATCCCTT GAAAGAGGTC TTGGTAGAAG TACATTCTTT
AGAAGCTACG AAAGCTTTGA AAAAAGATAC CCGGGGGGAC AACTCGATAA ATTCGAAGTT
CCTGAAAAAG GAGTTAGAGG TTACAGAGCT GAGGATGCTT ACCGAAACTT AGGGGACGAT
GGTTTAATCG ACCTTGAATC CAATGTAAGA TCTGGAGATG TAATTTTAGG AAAAACGTCA
CCTCCGAGAT TTTTAGAAGA ACAGGAAATC ACCCTTCAAA CAAAATCACA AAGAAGAGAC
ACTTCCGTTA CGATCAGACA CGGTGAAGAA GGAATCGTTG ACCTTGTAAT TTTAAGTGAA
ACGAAAGAAG GAAACAGACT TGGAAAAGTT AGAGTTAGAG ATTTAAGAAT TCCTGAGTTT
GGTGACAAAT TTGCATCCAG ACACGGTCAG AAAGGCGTTA TCGGACTTAT TGTTCCACAA
GAAGACCTTC CATACACCGA AGATGGAGTA ATTCCAGATT TAATTATCAA CCCACACGCA
ATTCCTTCGA GAATGACTAT CGGACAGGTT CTTGAAATGA TTGGCGGTAA AGTTGGTTCT
TTAGAATGCA GAAGAATCGA CGGAACAATT TTCAGCGGCG AAAGCGAATG GAAATTAAGA
GAAGGCCTTG AAAAATACGG CTTCGAACAC CATGCAAAAG AAGCAATGTA CGATGGAAAA
TCAGGTAGAA AATTAGAGTG CGATATTTTC GTTGGAGTTG CATACTACCA GAAACTACAC
CACTTGGTTG CTGGAAAAAT CCACGCAAGA AGCAGGGGGC CAATCCAAGT TCTTACAAGA
CAACCTACCG AAGGTAGGGC AAGAGAAGGA GGCCTTAGAT TTGGGGAAAT GGAAAGAGAT
GTATTAGTTG CCCACGGTGC TGCAATGCTC CTTAAAGAAA GACTTCTCGA TGAATCAGAC
CCTCACGAAG ACTACGTTTG TGCAAAATGT GGTGAAATTG CAATCTTCGA TTACAAGAGG
GGCATGAAAT TCTGTCCAGT TTGTGGTGAA TCAGAAGACA TTCAGGATAA CAGAAAGATC
CCGCCTGTAA AAATTGCTTA TGCATTCAAA TTATTGTTGG ATGAACTTAA GAGTATGGGA
ATCGATCCAA AATTAGAATT AAAAGATAGA GCATAA
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| Protein sequence | MEKQTNVYVN GKLIDTTEDP ETLVKNLREN RRSGKLSPST SISFNEESND VHISTDGGRA
VRPLVVVENG ASKLTQELLE KVDAQELTFH ELVDSGVIEY LDAEEEENAR IAMYEDEITE
ENTHIEIDPL VILGIGAGVA PYPEHNSAPR ITMAAAMSKQ SLGIPMANIK WRMDTRGHLL
HYPQVPLVRT KHQEILGFDK RPAGQNFVVA VMSYEGYNME DAFIINKASL ERGLGRSTFF
RSYESFEKRY PGGQLDKFEV PEKGVRGYRA EDAYRNLGDD GLIDLESNVR SGDVILGKTS
PPRFLEEQEI TLQTKSQRRD TSVTIRHGEE GIVDLVILSE TKEGNRLGKV RVRDLRIPEF
GDKFASRHGQ KGVIGLIVPQ EDLPYTEDGV IPDLIINPHA IPSRMTIGQV LEMIGGKVGS
LECRRIDGTI FSGESEWKLR EGLEKYGFEH HAKEAMYDGK SGRKLECDIF VGVAYYQKLH
HLVAGKIHAR SRGPIQVLTR QPTEGRAREG GLRFGEMERD VLVAHGAAML LKERLLDESD
PHEDYVCAKC GEIAIFDYKR GMKFCPVCGE SEDIQDNRKI PPVKIAYAFK LLLDELKSMG
IDPKLELKDR A
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