Gene MmarC5_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0184 
Symbol 
ID4928615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand+ 
Start bp154701 
End bp155357 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content30% 
IMG OID640165684 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001096716 
Protein GI134045230 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0710] 3-dehydroquinate dehydratase 
TIGRFAM ID[TIGR01093] 3-dehydroquinate dehydratase, type I 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.836768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTGTA TTCCCGTAAT TGATGAAGAT ATGTCCGATG CAATAAATTC CGCAAAAGAA 
GCTTTAAAAT ACGGAGATAT CGTTGAATTT AGGGTAGATT TATTAAACAA CGTAACTTTT 
GAGGATATTA CAGAGTTTTC AAAAATCCCA TCTATAATTA CAATAAGGGC AGAATGGGAA 
GGCGGAGCTT GGAAAAAATC CAATGAAGAA AGAATCGAAC TTTTAAAACA CGCGATAAAA 
AACAATGCGA AATTTGTAGA TATCGAACTA AAAGAAGAAA AAAATTTAGA ATTAGTTAAA 
TATAGAAATG AAATTAGATC AAATACAAAA ATTATCGTTT CATACCACGA TTTTGAAAAA 
ACTCCCGAAA TAGATGAATT AATTGATGTA GTTGAAAAAG AGTTAAAAAT CGGAGATATT 
GCAAAGTTTG CAACGTTTGC CAATTCAAAA GAAGACACAT TAAAAATATT GAATTTGATG 
AACAAATATT ATGGAAAAAT AATTGCAATC GGTATGGGCG AATCTGGAAA ACTTACAAGG 
ATTTTGGGTT TAGATTTTGG ATCAATACTC ACATTTGCAT CGATGGAAGG AAAAGCATCA 
GCTCCAGGTC AGGTTGATGT TAAAAAATTA AAAGAAATTT TAGAATTAAT AGAATAA
 
Protein sequence
MICIPVIDED MSDAINSAKE ALKYGDIVEF RVDLLNNVTF EDITEFSKIP SIITIRAEWE 
GGAWKKSNEE RIELLKHAIK NNAKFVDIEL KEEKNLELVK YRNEIRSNTK IIVSYHDFEK 
TPEIDELIDV VEKELKIGDI AKFATFANSK EDTLKILNLM NKYYGKIIAI GMGESGKLTR 
ILGLDFGSIL TFASMEGKAS APGQVDVKKL KEILELIE