| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0175 |
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| Symbol | rpl22p |
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| ID | 4929244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 143838 |
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| End bp | 144299 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640165675 |
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| Product | 50S ribosomal protein L22P |
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| Protein accession | YP_001096707 |
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| Protein GI | 134045221 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01038] ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000281865 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAC TAAAATACAA AGTTGAAGCT GACCCAAAAA ACACTGCAAG AGCTATGGGC
AGAACTTTAA GAATATCAAG AAAACATGCT ATTGAACTTT GCAGAGAATT ATCTGGAATG
AAATTAGATG CTGCTGTTGC ATACTTAAAC AGAGTAATCG CATTAGAAAC ACCAGTACCA
TTCAAAGTTC ACAACAAAGA CTTACCACAC AGAAAAGGAA AAATTGGAAC GCACTCAGGT
AGATTCCCAC AGAAAGCTTC GCTAGAAATC TTACAAGTTT TAGATAACGC TAAGAAAAAC
GCTGAGCAAA AAGGATTAAA CACAGAAAAA TTAAGAATTA AACACATATC TTCAAACAGA
GGCTTCACAA TTAAAAGATA CATGCCAAGA GCATTTGGTA GAGCAAGCCC TAAAAACCAA
GAAACAATAC ATATCCAAGT AATCCTTGAA GAATTCTACT AA
|
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| Protein sequence | MAKLKYKVEA DPKNTARAMG RTLRISRKHA IELCRELSGM KLDAAVAYLN RVIALETPVP
FKVHNKDLPH RKGKIGTHSG RFPQKASLEI LQVLDNAKKN AEQKGLNTEK LRIKHISSNR
GFTIKRYMPR AFGRASPKNQ ETIHIQVILE EFY
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