Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0112 |
Symbol | |
ID | 4927594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 99904 |
End bp | 100545 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640165612 |
Product | signal transduction protein |
Protein accession | YP_001096644 |
Protein GI | 134045158 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0311515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAA AAAGCTTGAT GGATAAAAAA TTTATTAAAA TATATCCTGA TTTTACTGTA CAGACGGTTA TTGACTTAAT GTATAAAAAT AAAAAATTCA GCACACCAAT TATTGACAAT GACGGTAAAA TGGTTGGCTG GACGACTGCT ATTGATTTGA TGGTAGTTTC CGATAAAAAT ATTCCAATAA AAGACATTAT GAGTCCCATT GCGGATGTAA TTGTTGTAAA TAAAAACGAA CCTGCAAGGG AAGCAGTTAC CAAAATAGTT GAATACAAAG TTATAAGCAT TCCAGTTTTA AATGACAGAG GACAGCTTGT TGGAATTGTT AGAAACTGCG ATATTACAAA AACTCTTTCT AAACTGTACG ACATTCCAGT ACACAGTATT TTTAAATCAT TAATGGGCGA ATTAAAAGGG ATTTCCTGGG AAGAATTAAT GAATGCTGCT GCAATCGTTA CAAAACAGAC TACTGGTGAA ACGATCACTG GTGAAGATTA CGAAAGAAGA ATAAAAGGTT CTACATTCGG GCAAGCCATC TGGGCTTGTG GGGGACTTGA AAAATTCTTT ACCGGCCTTA TAAAAATCGG TGAAGTTGCG CTCGCAAGAA AAGTAAGTTG CAAAAATGTC ATAAAAAAAT AA
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Protein sequence | MKVKSLMDKK FIKIYPDFTV QTVIDLMYKN KKFSTPIIDN DGKMVGWTTA IDLMVVSDKN IPIKDIMSPI ADVIVVNKNE PAREAVTKIV EYKVISIPVL NDRGQLVGIV RNCDITKTLS KLYDIPVHSI FKSLMGELKG ISWEELMNAA AIVTKQTTGE TITGEDYERR IKGSTFGQAI WACGGLEKFF TGLIKIGEVA LARKVSCKNV IKK
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