| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0091 |
|---|
| Symbol | |
|---|
| ID | 4928428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 80456 |
|---|
| End bp | 81259 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640165590 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_001096623 |
|---|
| Protein GI | 134045137 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATTT CACTAATGGG TTACACACTA TCAATAAATG TGTTTTTAAT TGTTAAGGCT
ATTTTAGTAC TTGTTCTAGG GTATTTGGCA GTAAGGATTG TGTCAGGCAT TTTAGAAAGA
GGCGCTAAAA AAAGTAAGAT TCCAGAACTG GTTTCTGAAT TTGTTATCAA GCTATTTAGT
GCAATACTTT ATTTATTTGT GATATTGCTC GCAGTAGGTG TTTTTGGTGT TGAAACAGGG
CCAATAATTT TGGGACTTTC TGCATCACTC GGTTTAATTT TAGGTTTTGG TCTTCAAGAC
ACACTTACAA ATCTAACATC TGGCCTTTGG ATTGCGGTTA TGAAGCCACT AGACAAAGAA
GAAACTGTTC AAATCGGTGG AATGACTGGA AAAGTAGTTG AAGTTGGGAT AATGGCAACT
AAACTTTTAA CTCCCGACAA TGTGGTTATT ACACTCCCAA ATAAGTTAGT TTGGGGAAGT
CCTATAACTA ATTTCACTAG AATGGATATA AGAAGAGTAG ATGTTGCAGT TGGAGTTAGC
TACGGCGAAA ATTTAGACAA TGCAGTATCT ACAGCACTCG AACTTATTTC TGGACATCCT
TTAGTATTAA AAGACCCTGC ACCAGCAGTA GCCATAACTG GTCTTGGTGA TTCTTCTGTA
GATTTACAGC TTAGGGCATG GACGAAAACT GGCGACTACT GGGCTGTAAA AGGAGATCTT
ACAAAAGGAA TCTACGAAAA ATATGGAAAA GAGGGTATTG AAATTCCGTT CCCACAGATG
GATGTACATA TCCACAAATA TTAA
|
|---|
| Protein sequence | MPISLMGYTL SINVFLIVKA ILVLVLGYLA VRIVSGILER GAKKSKIPEL VSEFVIKLFS
AILYLFVILL AVGVFGVETG PIILGLSASL GLILGFGLQD TLTNLTSGLW IAVMKPLDKE
ETVQIGGMTG KVVEVGIMAT KLLTPDNVVI TLPNKLVWGS PITNFTRMDI RRVDVAVGVS
YGENLDNAVS TALELISGHP LVLKDPAPAV AITGLGDSSV DLQLRAWTKT GDYWAVKGDL
TKGIYEKYGK EGIEIPFPQM DVHIHKY
|
|---|
| |