Gene MmarC5_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0067 
Symbol 
ID4927523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp58399 
End bp59157 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content30% 
IMG OID640165565 
Productextracellular solute-binding protein 
Protein accessionYP_001096599 
Protein GI134045113 
COG category[T] Signal transduction mechanisms
[E] Amino acid transport and metabolism 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.571905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAT TATATATGGT ATTGTTAACA CTGCTCAGCC CCCTTTCAAA TGTCGTCGAT 
ATTGAAAACG AATATCAAAT TACCGGCGTT TTGACTGTTG GAGTATATCC TGATCTAACC
CCATATACCT ATGAAGAAAA CGGGGAATTA AAGGGGTTTG AGATTGATTT GATAAATGAA
ATAGCCAAAA GAATCGAGGT AACTCCAGAA TTTATACTAT ATAATTACAC TAACGAACCA
TACGAAGCGG TAAAAAACAA ACAAATAGAT TGTGCAATAT CTTCAAACTT TTTATCACGT
AATAATGACA ATATAGAATA TTCGAGAACG TATTTAAGTA CCTATGAAGT ATTAATGTGT
GAAAAAAGTC AGAAATTCTT CAGACTCGAA GATTTGAAAG ATAAAAAAAT AGGAGTACTT
AAAAATTCTA AAGCTGAAGA AAAAGCGAAA TATCTTCTTA GAAGTATGAA TTTTGAAATA
ATAACTTATG ACAATCCAAA AGATATTGAA AATGACATTG GATCTGGAAA TTTAGATGCT
GCAATTTCAG ATAAACACCA CCTGAATTAC ATTCAGAAAG AAAGTGATTC ATTGAAATTT
GTCCAAGAAC TCGACATCAA ATACGTGAGT ATGGTAATAA ATTCTAAAAA CCCTGAATTA
ACTGAAAAAA TTGATGAAAT TCTTCTGGAA ATGGAAGAAG ATGGAACATA TCAAGAAATA
TACGATAAAT GGTTTGGAAA TCTAGAAAAA TCTCTTTAA
 
Protein sequence
MKSLYMVLLT LLSPLSNVVD IENEYQITGV LTVGVYPDLT PYTYEENGEL KGFEIDLINE 
IAKRIEVTPE FILYNYTNEP YEAVKNKQID CAISSNFLSR NNDNIEYSRT YLSTYEVLMC
EKSQKFFRLE DLKDKKIGVL KNSKAEEKAK YLLRSMNFEI ITYDNPKDIE NDIGSGNLDA
AISDKHHLNY IQKESDSLKF VQELDIKYVS MVINSKNPEL TEKIDEILLE MEEDGTYQEI
YDKWFGNLEK SL