| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0060 |
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| Symbol | |
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| ID | 4929028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 49177 |
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| End bp | 50814 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640165558 |
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| Product | thermosome |
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| Protein accession | YP_001096592 |
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| Protein GI | 134045106 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.869644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAC CCGGAGTTTT ACCTGAAAAT ATGAAGAGAT ACATGGGAAG AGATGCTCAA
AGAATGAACA TCTTAGCAGG AAGAATCATC GCAGAAACAG TAAGATCAAC ACTCGGTCCA
AAAGGAATGG ACAAAATGTT AGTTGACGAC TTAGGAGACG TAGTTGTTAC AAACGACGGT
GTTACAATCT TAAGAGAAAT GAGTGTAGAA CACCCTGCAG CTAAAATGTT AATCGAAGTT
GCAAAAACAC AGGAAAAAGA AGTCGGCGAC GGTACAACAA CAGCTGTTGT AGTTGCTGGT
GAATTATTAA GAAAAGCTGA AGAATTATTG GACCAAAATG TACACCCAAC AATTGTTGTA
AAAGGATACC AAATGGCAGC TCAAAAAGCT CAAGAATTAT TAAAATCAAT TGCTTGCGAA
GTTGGAGCTC AAGACAAAGA AATCTTAACC AAAATCGCAA TGACTTCAAT CACCGGAAAA
GGTGCTGAAA AAGCTAAAGA AAAATTAGCT GACATCATCG TTGATGCAGT TTCAGCAGTA
GTTGACGAAG AAGGAAAAGT TGACAAAGAC TTAATCAAAA TTGAGAAAAA ATCAGGCGCA
TCAATCGACG ACACCGAATT AATCAAAGGT GTTTTAGTTG ACAAAGAAAG AGTAAGCGCT
CAAATGCCTA AAAAAGTAAC TGATTCAAAA ATTGCACTCT TAAACTGTGC AATCGAAATC
AAAGAAACAG AAACAGACGC AGAAATCAGA ATCACTGACC CTGCAAAATT AATGGAATTC
ATCGAACAAG AAGAAAAAAT GTTAAAAGAC ATGGTTGCTG AAATCAAAGC AAGCGGTGCA
AACGTTTTAT TCTGTCAAAA AGGAATCGAT GACTTAGCAC AACACTACTT AGCTAAAGAA
GGAATCATGG CTGCAAGAAG AGTTAAAAAA TCCGACATGG AAAAATTAGC TAAAGCTACC
GGTGCTAACG TAATTACAAA CATCAAAGAC CTGTCAGCTG AAGACTTAGG TGATGCAGGT
CTCGTTGAAG AAAGAAAAAT CTCCGGAGAT TCAATGATCT TCGTAGAAGA ATGCAAACAC
CCAAAAGCAG TTACAATGCT CATCAGAGGT ACAACTGAAC ACGTAATTGA AGAAGTTGCA
AGAGCAGTGG ACGACGCTGT TGGTGTAGTT GCATGTACTA TCGAAGATGG AAGAATCGTA
GCTGGTGGAG GTTCAACAGA AGTTGAATTA TCCATGAAAT TAAGAGAATA CGCAGAAGGA
ATCAGCGGAA GAGAACAACT TGCTGTTAGG GCATTCGCTG ATGCTTTAGA AGTAATCCCA
AGAACCTTAG CTGAAAATGC AGGACTCGAT GCAATCGAAA TCCTCGTTAA AGTTAGAGCA
GCACACGCAA GCAACGGCAA CAAGTGCGCA GGTTTAAACG TATTCACCGG AGAAGTTGAA
GACATGTGCG ACAACGGTGT TGTTGAACCA TTAAGAGTTA AAACACAAGC AATCCAGTCA
GCAGCTGAAT CAACAGAAAT GTTACTCAGA ATCGACGACG TAATTGCTGC AGAAAAATTA
AGAGGCGGCC CTGACATGGG TGACATGGGA GGCATGGGCG GAATGGGAGG CATGGGCGGA
ATGCCAGGAA TGATGTAA
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| Protein sequence | MAQPGVLPEN MKRYMGRDAQ RMNILAGRII AETVRSTLGP KGMDKMLVDD LGDVVVTNDG
VTILREMSVE HPAAKMLIEV AKTQEKEVGD GTTTAVVVAG ELLRKAEELL DQNVHPTIVV
KGYQMAAQKA QELLKSIACE VGAQDKEILT KIAMTSITGK GAEKAKEKLA DIIVDAVSAV
VDEEGKVDKD LIKIEKKSGA SIDDTELIKG VLVDKERVSA QMPKKVTDSK IALLNCAIEI
KETETDAEIR ITDPAKLMEF IEQEEKMLKD MVAEIKASGA NVLFCQKGID DLAQHYLAKE
GIMAARRVKK SDMEKLAKAT GANVITNIKD LSAEDLGDAG LVEERKISGD SMIFVEECKH
PKAVTMLIRG TTEHVIEEVA RAVDDAVGVV ACTIEDGRIV AGGGSTEVEL SMKLREYAEG
ISGREQLAVR AFADALEVIP RTLAENAGLD AIEILVKVRA AHASNGNKCA GLNVFTGEVE
DMCDNGVVEP LRVKTQAIQS AAESTEMLLR IDDVIAAEKL RGGPDMGDMG GMGGMGGMGG
MPGMM
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