Gene MmarC5_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0055 
Symbol 
ID4928555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp44977 
End bp45651 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content33% 
IMG OID640165553 
Producthydrogenase accessory protein HypB 
Protein accessionYP_001096587 
Protein GI134045101 
COG category[O] Posttranslational modification, protein turnover, chaperones
[K] Transcription 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00101] urease accessory protein UreG
[TIGR00073] hydrogenase accessory protein HypB 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTTG TCGACGTTTT GAATATCGGA AAAGACATAA TTAAGGCAAA TAATAAAAAT 
GCGGATAAAA ACAGGAAAAT ATTGGAAAGT CACGGGATTG CAGCTTTTGA TTTTATGGGT
GCGATTGGAA GTGGTAAAAC TCTTTTAATC GAAAAATTAA TCAATGAATT AAAAGACGAA
TACAAAATTG CATGCATTGC AGGAGATGTT ATTGCAAAAT ACGATGCTGG AAGGATGGAA
AAGCACGGTG TTAAAGTTAT TCCATTAAAT ACTGGAAAAG AATGCCACCT CGATGCTCAC
CAAGTAGGAC ATTGCTTCCA CGATTTAGAT CTTGATAATT TAGATATTAT ATTTATTGAA
AACGTTGGAA ACTTGATATG TCCAACAGAC TTTGATCTGG GAACACACAA AAGAACTGTT
GTTGTAAGCG TTACTGAAGG GGACGATACC GTTGAAAAAC ACCCTGAAAT CTTTAAAACT
GCAAATTTAA CAATAATCAA CAAAATCGAC ATTTGTGAAG CTGTTGGCGC TGATCCGCAA
AAAATGTTAA ACGATGCAAA GAAAATCAAC AAAGATATGG AAGTTCTTTT AACTGCCATA
AAACACGGGC AAGGTGTTGA TGAAGTTGTT AATTTCATTA AAAAAACAGT TAAAGAAGTT
AAAAATCAAA AATAA
 
Protein sequence
MHFVDVLNIG KDIIKANNKN ADKNRKILES HGIAAFDFMG AIGSGKTLLI EKLINELKDE 
YKIACIAGDV IAKYDAGRME KHGVKVIPLN TGKECHLDAH QVGHCFHDLD LDNLDIIFIE
NVGNLICPTD FDLGTHKRTV VVSVTEGDDT VEKHPEIFKT ANLTIINKID ICEAVGADPQ
KMLNDAKKIN KDMEVLLTAI KHGQGVDEVV NFIKKTVKEV KNQK