Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0039 |
Symbol | |
ID | 4928807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 30553 |
End bp | 31164 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640165537 |
Product | nucleic acid binding, OB-fold, tRNA/helicase-type |
Protein accession | YP_001096571 |
Protein GI | 134045085 |
COG category | [R] General function prediction only |
COG ID | [COG4085] Predicted RNA-binding protein, contains TRAM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCGTCTT TAGTTCTAAA TGATAAAAAA ATAGTATTTT CATGTATTTT ATGCGTAATC TTTGGAATTT CTTTTTTATC GACATATAAC ATTGATCCCG AAGAAAAATA CATATCTAAT TTAAATGAGG GCGATTATGT AAAAATAACT GCTAAAATAC AGAAATTAGA TGTAAAAATG AAGGAATATC TCGAAGTTAC AGGAATAAAA TCCATAAAGT TAATGGATGA AACTGCTGGA GATCTTTTAG TTTACGTTTC AGACGATATA TCTGATGAAT TTTTAGAAAT TATATTGAAA ACAACCCCTA GAATAAAGGA AGGGGATATC GTTGAAGTAA CTGGAAAAAT TCAAATTTAC AATGGACTTT ATGAAATAGT TTTAAAAGAT CCAAATGATT TTGAATTAGT CGAAAAAGTA AATTTTGAGC GAGATATATT TCTTTCAAAA TCCAGAACAA ACTACTATGC CTCAAAAAAC AGTAAAGTGT ATCACAATTA TGAAGACTGC CCATATGGCG GAAAAATAGT TGAAAAAATC TATTTTAAAA CTGAAGAGGA TGCGATAGAT TTGGGATATG AATTATGCAG TTACTGTGAA AAAAGGGATT AA
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Protein sequence | MSSLVLNDKK IVFSCILCVI FGISFLSTYN IDPEEKYISN LNEGDYVKIT AKIQKLDVKM KEYLEVTGIK SIKLMDETAG DLLVYVSDDI SDEFLEIILK TTPRIKEGDI VEVTGKIQIY NGLYEIVLKD PNDFELVEKV NFERDIFLSK SRTNYYASKN SKVYHNYEDC PYGGKIVEKI YFKTEEDAID LGYELCSYCE KRD
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