| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0032 |
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| Symbol | rpl4lp |
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| ID | 4928222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 24991 |
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| End bp | 25749 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640165529 |
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| Product | 50S ribosomal protein L4P |
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| Protein accession | YP_001096564 |
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| Protein GI | 134045078 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.521177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGTTA AAGTTTACAA TTTAGATGGT TCTGAAAAAG GAGATATTGA ATTACCTGCT
GTATTTGAAA CAGAATACAG ACCAGATTTA ATTAAAAGAG CAGTAATCTC ATCATTAACC
GCAAAATTAC AACCAAAAGG TTGCGATGCG TTTGCAGGTT ACAGAACTTC AGCTAAATCA
ATTGGAAAAG GACATGGTAA AGCTAGAGTT AGAAGAACCG CACAAGGTGC TGGTGCATTC
GTTCCTCAAG CAGTGGGCGG AAGAAGAGCT CACCCTCCAA AAGTTGAAAA AATATTATTC
GAAAGAATAA ACAAAAAAGA AAAATTAAAA GCATTAGCAA GCGCTATTGC AGCTTCAGCA
ATTCCTGAAA TCGTTTCAGC AAGAGGCCAC AAAATCGAAG GTGTTCCTTC ATTACCTTTA
GTTGTTAACG CAGAATTCGA AGGACTTGTT AAAACAAAAG AAGTTTTAGA TGTTTTCAAA
GCTTTAAACT TAGCTGCTGA CGTAGAAAAA GCTAAAGACG GCATTAAAAT TAAAGCTGGA
AGAGCAAAAT TAAGAGGAAG AAAATACAAA AAACCAAGAA GTGTTTTGGT TGTTGTAGGC
GATGCATGTG AAGCAATTGC AGCATCAAGA AACCTCGCAG GTGTAGATGT AATTACAGCT
AACGATTTAA GCGCAATACA CATTGCACCA GGAACAATGG CTGGAAGATT AACACTTTGG
ACTGAAAATG CCATTGAAAA AATAAACGGA AGATTTTAA
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| Protein sequence | MNVKVYNLDG SEKGDIELPA VFETEYRPDL IKRAVISSLT AKLQPKGCDA FAGYRTSAKS
IGKGHGKARV RRTAQGAGAF VPQAVGGRRA HPPKVEKILF ERINKKEKLK ALASAIAASA
IPEIVSARGH KIEGVPSLPL VVNAEFEGLV KTKEVLDVFK ALNLAADVEK AKDGIKIKAG
RAKLRGRKYK KPRSVLVVVG DACEAIAASR NLAGVDVITA NDLSAIHIAP GTMAGRLTLW
TENAIEKING RF
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