Gene MmarC5_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0025 
Symbol 
ID4927616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp19480 
End bp20832 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content36% 
IMG OID640165522 
Productsignal recognition particle protein Srp54 
Protein accessionYP_001096557 
Protein GI134045071 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.205386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATA AATTAGGCCA GAACCTCTCT GATGCACTAA ACAAAATTAA GAACGCTACT 
TTTGTCGATA AAAAACTCGT AAAAGAAGTA ATTAAAGATA TCCAGAAAGC TTTAATCCAA
TCTGACGTTA ATGTAAAGCT CGTATTTAAT ATGAGCAAGG AAATTGAGAG AAAAGCTATT
GAAGAAGCGC CTCCAAAAGG ACTCTCGAAA AAAGAGCACA TTGTAAAGAT TGTTTACGAT
GAACTTGTAA AATTACTTGG AGAAACCACT CAAAAATTAG AACTTGACCC TTCAAAAAAA
TCTGTAATTT TACTTATAGG TATTCAGGGA AGCGGTAAGA CAACGAGTGC CGCAAAACTT
GCAAGATATA TCCAGAAAAA AGGTTTAAGA CCTGGATTAA TCGCAGCGGA TGTTTACAGA
CCTGCAGCAT ACCAGCAATT GAAGCAGCTA TCTGAAAAAA TAAATGTTCC ACTATTTGGT
GACGAAACAA GAACAAAAAC TCCCGTAGAC ATCACTAAAG AAGGAATGGA AAAACTGAAA
AAAGTAGATG TTATAATCAT CGATACAGCA GGTAGGCACA AGGAAGAAGA AAGTCTCTTA
GCTGAAATGA AAGAAATGAA GGATTTAACC AATCCAAATG AAATAATCCT TGTAATTGAT
GGAACATTAG GTCAGCAGGC TAAAAATCAA GCAAAAGCAT TCAAAGAATC AGTTTCAGAA
ATCGGAAGCA TTCTTGTTAC AAAATTAGAT GGTTCAGCAA AAGGTGGTGG TGCGTTAAGT
GCCGTTGCAG AAATCAATGC TCCAATTAAA TTTATCGGAA CTGGTGAAGG AGTCGACAAT
TTAGAACAGT TTGATCCTAA AAAATTCATA TCCAGGATTC TTGGACTTGG GGACTTAGAC
TCTCTTTTGG AGAAAACTGA AGACATAATG GACGAATCAA CGGAAGAAAG TATTGATTCA
ATTTTAAAAG GTAAATTTAC ATTAATTGAG CTTTATGCAC AGCTTGAAAC CATATCAAAA
ATGGGTCCAA TGAAACAGAT TTTAAGTATG ATTCCGGGAA TGGGCGGAAA CCTTCCAAAA
GAAGCTGCAC AGTTAACTGA AGACAAGCTG AAAAGATACA AAATCATGAT GGACTCTATG
ACACTGGAAG AAAAAGAAAA TCCTGAACTC ATAAAAACTT CAAGACTCCA GAGAATTGCA
AAAGGAGCAG GGGTAAAACA GGATGAAATA AAGGATCTTT TGAAGTACTA TTCAACTACA
AAAAATGCTT TTGGAAATTT GAAGCGTGGA AAAATGCCAA AAATGGGTGG ACAGATGGGC
CAGATCATGA GGCAGTTAAT GTATAAAGAT TAA
 
Protein sequence
MLDKLGQNLS DALNKIKNAT FVDKKLVKEV IKDIQKALIQ SDVNVKLVFN MSKEIERKAI 
EEAPPKGLSK KEHIVKIVYD ELVKLLGETT QKLELDPSKK SVILLIGIQG SGKTTSAAKL
ARYIQKKGLR PGLIAADVYR PAAYQQLKQL SEKINVPLFG DETRTKTPVD ITKEGMEKLK
KVDVIIIDTA GRHKEEESLL AEMKEMKDLT NPNEIILVID GTLGQQAKNQ AKAFKESVSE
IGSILVTKLD GSAKGGGALS AVAEINAPIK FIGTGEGVDN LEQFDPKKFI SRILGLGDLD
SLLEKTEDIM DESTEESIDS ILKGKFTLIE LYAQLETISK MGPMKQILSM IPGMGGNLPK
EAAQLTEDKL KRYKIMMDSM TLEEKENPEL IKTSRLQRIA KGAGVKQDEI KDLLKYYSTT
KNAFGNLKRG KMPKMGGQMG QIMRQLMYKD