Gene MmarC5_0024 details

Gene Information

• Locus tag: MmarC5_0024
• ID: 4929191
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 18896
• End bp: 19453
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640165521
• Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
• Protein accession: YP_001096556
• Protein GI: 134045070
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase
• TIGRFAM ID: [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.86199
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGAGA TAATAGTTTG CATTACAGGA GCTAGCGGTG TAATTTATTC AAAACGGCTT 
TTAGAAGTTT TAAAAGAAGA AAATATTAAA ACATCGCTGA TAATTTCAAA TTCCGCGAAA 
AAAATAATTA AACACGAACT TAAAATGGAA ATTGACGAAT TTAAAAAACT TGCAGATAAC 
TACTACGAAA ACGATAACTT TTTTTCACCT GTAGCATCAG GTTCACATAA ATTTAAAGCA 
GCAGTGGTAG TTCCATGTTC TATGAAGTCT TTATCATCAA TAGCAACTGG ATACAGCGAT 
AATTTAATTG GAAGAGTCTG TGACATTGCA TTAAAAGAGC GAAGAAATTT AACAATTGTT 
CCAAGAGAAA TGCCATTTAG TACAATTCAT CTTGAAAATA TGGCGAAACT ATCACATTTA 
GGAGTTTCAA TAATTCCGCC AGCTCCTGGA TTTTATAACG ATCCAAAAAC AATAGACGAC 
CTCGTCAACT TTGTTGTTGG AAGAATTTTG GACAATTTAA AAATCGAAAA TAAAATATTT 
AAGAGATGGG GAGAATAA 

 

Protein sequence

MDEIIVCITG ASGVIYSKRL LEVLKEENIK TSLIISNSAK KIIKHELKME IDEFKKLADN 
YYENDNFFSP VASGSHKFKA AVVVPCSMKS LSSIATGYSD NLIGRVCDIA LKERRNLTIV 
PREMPFSTIH LENMAKLSHL GVSIIPPAPG FYNDPKTIDD LVNFVVGRIL DNLKIENKIF 
KRWGE