Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0021 |
Symbol | |
ID | 4928764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 14899 |
End bp | 16230 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640165516 |
Product | methyl-coenzyme M reductase, beta subunit |
Protein accession | YP_001096553 |
Protein GI | 134045067 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4054] Methyl coenzyme M reductase, beta subunit |
TIGRFAM ID | [TIGR03257] methyl-coenzyme M reductase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAAGT ATGATGATAA GATCAGTTTG TACGATGCGA AAGGAAACCT AGTAGCCGAC AATGTACCAT TAGAAGCTAT TAGCCCATTA TATAATCCTA CCATCAAAAA CATGGTAAAG AACATTAAAA GAACCGTTGC TGTAAACCTC GCTGGTATTG AAAGTACCTT AGCTGCAGGT AAAATCGGTG GAAAAGGATG CCAAGTTCCA GGAAGAACTT TGGACATATC CGCAGTAAGC AATGCTCAGG CTATTGCTGA CGAAGTAGAA AAAATCTTAA AAGTATCCGA AGATGACGAT ACAGCAGTAA AATTAGTTAA CGGCGGAAAG CAGTTAGCTG TGCAAGTTCC AACCGCAAGA TTGGAAGTAG CTGCAGAATA CTCAGTATCA ATGCTTTCAA CCGCTATGGC ATTGAAAGAA GCACTTATTA AAACATTCGA CATTGACATG TTCGATGGTT CAACAGTGCA CGCTGCAATT GTTGGTAACT ACCCACAGGT TATGGATTAC GCAGGCGGTA ACATTGCGTC ACTTTTAGGT GCACCTTCAA ACATGGAAGG TTTAGGTTAC GCTTTAAGAA ATATTCCGGT TAACCACGCG GTTGCTACAA CCAAGAAAAA CATGATGAAC GCTATTGCAT TCTCATCAGT TATGGAACAG ACTGCAACAT TCGAAATGGG TGACGCAGTA GGATCATTCG AAAGACAGCA TTTACTTGGT TTAGCTTACC AAGGATTAAA CGCTGATAAT TTAGTTATTG ACTTTATTAA AGCAAATGGA AAAGGAACTG TTGGTTCAGT TGTTGAAACA GTTGTTGAAA GAGCAATTGC TGACGGCGTA ATTGTTGTTG ACAAAACAAT GAGCTCAGGA TTCAACATGT ACAAACCAGC TGACGTAAAC AAATGGAATG CTTACGCAGC AGCAGGTTTA GTTGCAGCAG TTGCAGTAAG CTGTGGTGCA GCAAGAGCAG CACAAAACGT TGCTTCAGTT ATTTTATACT TCAACGATAT TCTAGAGTAC GAAACCGGTT TACCTGGTGT TGACTACGGT AGATCAATGG GTACTGCAGT AGGATTCTCA TTCTTCTCAC ACTCAATCTA CGGTGGCGGT GGACCTGGTA TCTTCAACGG TAACCACGTT GTAACCAGAC ACTCCAAAGG ATTCGCTATT CCTCCAGTAT GTGCGGCAAT GTGTGCAGAT GCAGGTACAC AGATGTTCTC CCCTGAAACT ACTTCAGGAT TAGTTGGTGC AGTATACTCA GCATTCGACG AATTCAGAGA ACCAATGAAA TACGTAATTG AAGGAGCTTT AAGCATTAAA GACCAATTTT AA
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Protein sequence | MVKYDDKISL YDAKGNLVAD NVPLEAISPL YNPTIKNMVK NIKRTVAVNL AGIESTLAAG KIGGKGCQVP GRTLDISAVS NAQAIADEVE KILKVSEDDD TAVKLVNGGK QLAVQVPTAR LEVAAEYSVS MLSTAMALKE ALIKTFDIDM FDGSTVHAAI VGNYPQVMDY AGGNIASLLG APSNMEGLGY ALRNIPVNHA VATTKKNMMN AIAFSSVMEQ TATFEMGDAV GSFERQHLLG LAYQGLNADN LVIDFIKANG KGTVGSVVET VVERAIADGV IVVDKTMSSG FNMYKPADVN KWNAYAAAGL VAAVAVSCGA ARAAQNVASV ILYFNDILEY ETGLPGVDYG RSMGTAVGFS FFSHSIYGGG GPGIFNGNHV VTRHSKGFAI PPVCAAMCAD AGTQMFSPET TSGLVGAVYS AFDEFREPMK YVIEGALSIK DQF
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