Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0017 |
Symbol | |
ID | 4928414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 11309 |
End bp | 12970 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640165512 |
Product | methyl-coenzyme M reductase, alpha subunit |
Protein accession | YP_001096549 |
Protein GI | 134045063 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4058] Methyl coenzyme M reductase, alpha subunit |
TIGRFAM ID | [TIGR03256] methyl-coenzyme M reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.61947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCTG AAAAAAGATT ATTTTTGAAA GCCTTAAAGG AAAAATTCGA AGAAGACCCA AAAGAAAAAT ACACAAAATT CTATACCTAC GGTGGTTGGG AACAGTCAGC TAGGAAAAGA GAGTTCGTTG AAGCTAATGA AAAAATATTA GCTGAGAAAA GACAAGGAGT ACCACTCTAC AACCCGGACA TTGGTGTTCC TCTTGGTCAA AGAAAATTAA TGCCTTACAA ATTGTCAAAC ACTGACGACT ACTGTGAAGG TGACGATTTA CACTTCATGA ACAACGCTGC TATCCAACAA TTATGGGACG ATATCAGAAG AACCGTTATT GTAGGTATGG ACACTGCTCA CTCAGTTTTA GAAAAAAGAT TGGGTGTAGA AGTAACTCCT GAAACAATCA ACGAATATAT GCACACAATC AACCACGCTC TTGCTGGTGG TGCAGTTGTT CAAGAACACA TGGTTGAAGT TCACCCATCC CTTGCATGGG ATTGTTATGC TAGAATCTTC ACCGGTGACG ATGAGTTAGC TGACGAATTA GACGACAAGT TCTTAATCGA CATTAACAAA TTGTTCCCTG AAGATCAGGC TGAAACAATA AAAGCTGCAA TCGGTAAAAA AACATACCAA GTATCAAGAG TTCCATCACT CGTAGGTAGG GTATGTGACG GTGGTACAAT CTCAAGATGG TCTGCAATGC AGATCGGAAT GTCATTCATT ACCGCATACA AACTTTGTGC AGGGGAAGCT GCAACAGCTG ACTTCTCATA TGCTTCAAAA CACGCTGACG TAATTCAGAT GGGTAACGCT TTACCAGGAA GAAGAGCAAG AGGTCCAAAC GAACCAGGAG GAATCAGATT CGGTATTCTC TCCGATGTTG TACAAACAAC AAGAGTTTCA GAAGACCCTG TTGAACAATC ATTAGAGGTT GTAGCTACTG GTGCTGCATT ATACGACCAA ATCTGGCTCG GTGCATACAT GTCCGGTGGT GTAGGATTCA CACAATACGC TACCGCGTCA TACACCGATG ATATTTTAGA TGACTTCTCA TACTACGGAT TAGATTACGT AGAGAAAAAA TACGGTAGAA TGGGAACAAA AGCTACAATG GATGTAGTAG AAGATGTTGC TGGTGAAGTT ACACTCTACG CATTAGAACA GTACGATGAA TACCCTGCAT TATTAGAAGA CCACTTCGGT GGATCACAAA GAGCTGCGGT TGCGGCTGCT GCATCAGGTA TCAGCGTATG TATGGCAACA GGTAACTCAA ACGCTGGTGT AAACGGCTGG TACTTATCAC AGTTATTACA CAAAGAATAC CACAGTAGAC TCGGATTCTA CGGTTACGAC TTGCAGGACC AGTGTGGTGC TTCAAACTCA CTCGCAATCA GAAACGACGA AGCTGCACCT CTTGAATTAA GAGGACCTAA CTACCCTAAC TACGCAATGA ACGTAGGTCA CCAGGGAGAA TACGCAGGTA TTGCACAATC TGCCCACTCC GCAAGAGGAG ATGCATTTGC ACTTAGCCCA TTGGTAAAAG TTGCATTCGC TGACCCAATG CTCGTATTCG ACTTCTCCAA ACCTAGAAAA GAGTTTGCTA GAGGAGCATT AAGAGAATTC GACGCTGCAG GAGAAAGAGA CATTATCTTA CCTGCTAAAT AA
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Protein sequence | MEAEKRLFLK ALKEKFEEDP KEKYTKFYTY GGWEQSARKR EFVEANEKIL AEKRQGVPLY NPDIGVPLGQ RKLMPYKLSN TDDYCEGDDL HFMNNAAIQQ LWDDIRRTVI VGMDTAHSVL EKRLGVEVTP ETINEYMHTI NHALAGGAVV QEHMVEVHPS LAWDCYARIF TGDDELADEL DDKFLIDINK LFPEDQAETI KAAIGKKTYQ VSRVPSLVGR VCDGGTISRW SAMQIGMSFI TAYKLCAGEA ATADFSYASK HADVIQMGNA LPGRRARGPN EPGGIRFGIL SDVVQTTRVS EDPVEQSLEV VATGAALYDQ IWLGAYMSGG VGFTQYATAS YTDDILDDFS YYGLDYVEKK YGRMGTKATM DVVEDVAGEV TLYALEQYDE YPALLEDHFG GSQRAAVAAA ASGISVCMAT GNSNAGVNGW YLSQLLHKEY HSRLGFYGYD LQDQCGASNS LAIRNDEAAP LELRGPNYPN YAMNVGHQGE YAGIAQSAHS ARGDAFALSP LVKVAFADPM LVFDFSKPRK EFARGALREF DAAGERDIIL PAK
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