Gene MmarC5_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0011 
Symbol 
ID4929107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp6723 
End bp7484 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content42% 
IMG OID640165506 
Producttetrahydromethanopterin S-methyltransferase subunit A 
Protein accessionYP_001096543 
Protein GI134045057 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4063] Tetrahydromethanopterin S-methyltransferase, subunit A 
TIGRFAM ID[TIGR02507] tetrahydromethanopterin S-methyltransferase, F subunit
[TIGR01111] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.25652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATA AAAAAGCCCC AGCAGCAGGA TGGCCTGTTG CTAACGGTGA ATATGTAGTG 
GGTAACCCTG AAAGCTGTGT TGCAGTAATT ACACTCGGTT CCCACGGTTT GGACCAGGCT
GCAATTGACG CTGGTGCAGC TATCTCAGGG CCATGCCACA CAGAAAACTT AGGAATTGAA
AAAGTTGTTG CAAACTACAT TTCAAACCCA AACATCAGAT TTATGGTAAT TGCTGGATCA
GAAGTTCAAG GACACATTAC TGGACAATGT ATCAAAGCAT TATACGAAAA CGGAATTGGT
GACGATGGTG GTATCATCGG AGCTAAAGGA GCTATTCCAT TCATGGAAAA CGTAGGAAAA
GAACCAGTTG GAAGACTCCA AACCCAAGTT GTTGAATGCA TTGATTTAAT TGATGTTGAA
GACAAGGGTA AAATTGCAGA CGCAATCAAA AACTGTATTT CAAAAGACCC TGGAGCATTT
GAAGAAGATC CAATGGTCAT TGAATTAGAA GGTGGCGCAG CTGCTGCTGG TGACGAAGAA
GGAGGCCTCA TGATTGAAGG TATCCCTACT GTAGCAGAGC CAGACATTGA ATCAATAAAA
TCATTAAACG AAGCATTGGA TTACAAAGTA GGATTGATGA CAAGAGACCT CGGATTAGCT
TCCGGTGTTC AGACTGAAAC TGTCACAGGA TTAATGTACG GTTCAGTATT TGCTATCGCA
TTAATTGCAG TCCCAATAGC TTTAAAATTC TTAATGGGGT GA
 
Protein sequence
MADKKAPAAG WPVANGEYVV GNPESCVAVI TLGSHGLDQA AIDAGAAISG PCHTENLGIE 
KVVANYISNP NIRFMVIAGS EVQGHITGQC IKALYENGIG DDGGIIGAKG AIPFMENVGK
EPVGRLQTQV VECIDLIDVE DKGKIADAIK NCISKDPGAF EEDPMVIELE GGAAAAGDEE
GGLMIEGIPT VAEPDIESIK SLNEALDYKV GLMTRDLGLA SGVQTETVTG LMYGSVFAIA
LIAVPIALKF LMG