| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0001 |
|---|
| Symbol | |
|---|
| ID | 4927910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 9 |
|---|
| End bp | 743 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640165496 |
|---|
| Product | 6-carboxyhexanoate--CoA ligase |
|---|
| Protein accession | YP_001096533 |
|---|
| Protein GI | 134045047 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1424] Pimeloyl-CoA synthetase |
|---|
| TIGRFAM ID | [TIGR01204] 6-carboxyhexanoate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGTT TAAAAATGAG AGCTTCAAGA AATGGAAATC ATGTTTCGGG TGCAGAACGG
TTAGTTAATG AAGAAAAAAT TGAAAAAATT TCTTCAGAGC TGATAAAACG TGCAATGAGT
CATGAAAATG GAGTTCCAGA TTTCATAAAT TTAAAGATAG AAAAAGTTAC TGAAAAAATA
AATAAGTTAA AGCATCTCGA AATAAAAACA GTTCATTCAA CTTCAAAAGA GAATTCCAGA
AATATTGCAA GGAATCTTTT GAAAAATGAA CTGGAAAAAT ATTATTTAAA GAATGGAAAA
GATATTGAAA AAATCGATGA ATTGATTGAT TTTGCATTTA AAATAATTGA TGCAGGAAAT
ATGCGTGGAG CCGCAATTTT AGATTTGGAT GGAAATCGAC TTGAAAATAT TTTAGAACGA
GGAATTCGCG TAAAAAATAT TGATACAACA GAAGAATTAT CTGAAAAAAT TTTAAAAGAT
AGTTCGTTAA CTGAAAGAAC TGTTGATGCA ATCGCAATCG CAACAAAAGT TGTAAACTGC
GGTGTAATTT CAGAACTTTG CACGTCTGAC AACTTTTCAT ATACGACTGG TTATGTTGCA
ACTAAAGACG GATACTTTAG AATTTTAAAT CTTAAGGATA AAGGGCAGGT GGGTGGACGA
GTATTTTTTG TTGAAAATTC AAAAATCGAT GAATTATATG ATAAGCTTGA AAACATGCCG
GTTACTGTTT ACTAG
|
|---|
| Protein sequence | MFSLKMRASR NGNHVSGAER LVNEEKIEKI SSELIKRAMS HENGVPDFIN LKIEKVTEKI
NKLKHLEIKT VHSTSKENSR NIARNLLKNE LEKYYLKNGK DIEKIDELID FAFKIIDAGN
MRGAAILDLD GNRLENILER GIRVKNIDTT EELSEKILKD SSLTERTVDA IAIATKVVNC
GVISELCTSD NFSYTTGYVA TKDGYFRILN LKDKGQVGGR VFFVENSKID ELYDKLENMP
VTVY
|
|---|
| |