| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3867 |
|---|
| Symbol | |
|---|
| ID | 4923991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 4601532 |
|---|
| End bp | 4601786 |
|---|
| Gene Length | 255 bp |
|---|
| Protein Length | 84 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640165493 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095989 |
|---|
| Protein GI | 127514792 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0759] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00278] conserved hypothetical protein YidD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000433459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000248153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAAG CTCAGTCGCC GTTACAATGG CTAGCCACTA AGCTGATCCG AGGCTACCAA
ATCTTTATCA GCCCTATACT GGGGCCAAAG TGCCGTTTTC ACCCCACATG TTCCAATTAC
GCGCTCGAAG CGATTCGATT GCACGGATTT GTGAAAGGGA GTTGGTTTGC AGGGAAACGC
GTATTAAAAT GTCACCCTTT ACATCCGGGC GGTGAAGATC CCGTCCCTCC AAAAAATAAC
AGGTGTAATA AATAG
|
|---|
| Protein sequence | MAQAQSPLQW LATKLIRGYQ IFISPILGPK CRFHPTCSNY ALEAIRLHGF VKGSWFAGKR
VLKCHPLHPG GEDPVPPKNN RCNK
|
|---|
| |