| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3845 |
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| Symbol | |
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| ID | 4924249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4576612 |
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| End bp | 4577988 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640165471 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001095967 |
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| Protein GI | 127514770 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000208529 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACAG GTACTGTTGT CCAAGTAATT GGCGCGGTTG TGGACGTTGA GTTTCCACAT
GATGCCGTAC CTCAGGTCTA TGACGCTCTA GAGATCAAAA GTGAAGGCTT GGTGCTGGAA
GTTCAGCAGC AGCTTGGTGG TGGTGTAGTT CGTACCATCG CTATGGGTTC TTCAGATGGT
CTGCGTCGTG GTATCGAGGT AGTAAACACA GGTTCACCTA TTACTGTTCC GGTTGGGAGT
GCAACTCTTG GCCGTATCAT GAACGTACTA GGTCAGCCAG TTGATGAAGC GGGTCCTATC
GGTGAAGATG AGCGTTATGT TATTCACCGT GAAGCTCCTT CATATGAAGA TCAATCAAAC
ACTACTGAGC TTTTAGAAAC TGGTATCAAG GTAATCGACC TTGTATGTCC GTTTGCTAAG
GGTGGTAAAG TAGGTCTGTT TGGTGGTGCG GGTGTTGGTA AGACAGTTAA CATGATGGAA
CTGATCAACA ACATCGCTAA AGCACACTCT GGTTTGTCAG TATTCGCCGG TGTAGGTGAG
CGTACTCGTG AGGGTAACGA CTTCTACTAC GAGATGGAAG AATCTGGCGT ACTCGACAAA
GTGGCCATGG TTTATGGTCA GATGAACGAG CCTCCAGGAA ACCGTCTACG TGTGGCACTG
ACCGGTCTGA CTATGGCTGA GAAGTTCCGT GACGAAGGTA AAGACGTACT ATTGTTCGTC
GATAACATCT ATCGTTACAC CCTAGCGGGT ACCGAAGTAT CTGCACTGCT AGGCCGTATG
CCTTCAGCGG TAGGTTACCA GCCAACACTG GCTGAAGAGA TGGGTGTTCT TCAGGAGCGT
ATTACCTCTA CTAAGACAGG GTCTATTACC TCTGTTCAAG CGGTATACGT ACCTGCGGAT
GACTTGACGG ATCCGTCACC AGCAACAACC TTCGCTCACT TGGATGCGAC CGTTGTATTG
TCACGTAACA TTGCTTCTCT GGGTATCTAC CCAGCGGTTG ACCCACTGGA TTCGACTTCA
CGTCAGCTAG ATCCACAGGT TGTTGGCCAA GAGCACTATG ACGTAGCAAG TGGTGTACAG
AACGTACTAC AGCGCTATAA AGAGCTGAAA GACATCATCG CGATTCTGGG TATGGACGAA
TTATCTGATG AAGATAAGAC TACCGTTGCC CGTGCGCGTA AGATTGAAAA ATATCTGTCT
CAGCCATTCT TCGTAGCAGA AGTATTCACC GGTTCTCCAG GTAAGTACGT TGCCCTTAAA
GACACTATCC GTGGCTTTAA AGGCCTATTG GAAGGTGAGT TCGACCACAT TCCAGAGCAA
GCGTTCTACA TGGCAGGTTC AATCGACGAA GTTATCGAGC GAGCTAACAA AAAATAA
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| Protein sequence | MSTGTVVQVI GAVVDVEFPH DAVPQVYDAL EIKSEGLVLE VQQQLGGGVV RTIAMGSSDG
LRRGIEVVNT GSPITVPVGS ATLGRIMNVL GQPVDEAGPI GEDERYVIHR EAPSYEDQSN
TTELLETGIK VIDLVCPFAK GGKVGLFGGA GVGKTVNMME LINNIAKAHS GLSVFAGVGE
RTREGNDFYY EMEESGVLDK VAMVYGQMNE PPGNRLRVAL TGLTMAEKFR DEGKDVLLFV
DNIYRYTLAG TEVSALLGRM PSAVGYQPTL AEEMGVLQER ITSTKTGSIT SVQAVYVPAD
DLTDPSPATT FAHLDATVVL SRNIASLGIY PAVDPLDSTS RQLDPQVVGQ EHYDVASGVQ
NVLQRYKELK DIIAILGMDE LSDEDKTTVA RARKIEKYLS QPFFVAEVFT GSPGKYVALK
DTIRGFKGLL EGEFDHIPEQ AFYMAGSIDE VIERANKK
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