| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3842 |
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| Symbol | |
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| ID | 4924246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4574156 |
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| End bp | 4575520 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165468 |
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| Product | UDP-N-acetylglucosamine pyrophosphorylase |
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| Protein accession | YP_001095964 |
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| Protein GI | 127514767 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
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| TIGRFAM ID | [TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.219458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00021617 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACTGA ACGTCGTTAT TTTGGCCGCA GGCAAAGGGA CTCGCATGCG CTCAGACCTT
CCCAAGGTTC TTCATCCCAT CGCCCATAAG AGCATGGTGC AGCATGTGAT AGATACCGCG
CATCAACTGG GGAGCGAGGC GATTCAGCTA GTCTATGGTT ATGGCGCCGA TAAGCTTCAG
GCCCGTCTGG GTGAGCAAGC GCTGAATTGG GTATTGCAAG CCGAGCAGTT GGGTACGGGT
CATGCCGTGG CTCAGGCCAA CGACAATATT GGCGATGATG ATACTGTCCT GATCCTCTAC
GGTGACGTGC CTCTGATCCA GGTCTCGACA CTGGAAGCCC TTTTGGCGGC ACGTGATGCT
AACGGCCTAG CCATTCTTAC CGTGAACCTG CATGATCCAA CCGGTTACGG TCGCATCGTA
CGTGAGGCCG GTAAGGTAGT GGGGATCGTC GAGCAGAAGG ATGCCAATGA GGAACAGCTT
AAGATCAATG AGATCAACAC GGGCATCATG GCCGCGCCGG GCAAGCAGCT AAAGGCCTGG
TTGGGTCAGT TGTCGTCGGA TAATGCCCAG GGCGAATATT ATCTTACCGA TATCGTGGCT
ATGGCCCATA GTGATGGCGT GAGCATCACC ACGGCGCAGC CTGAATCTGC CATCGAGGTG
GAGGGGGCGA ACAATCGCGT GCAACTGGCT CAATTGGAGC GCGCCTATCA GGCGCGCGCC
GCCGAGAAGC TCATGCTCGA AGGTGCTAAT CTGCGTGACC CCGCCCGCAT CGATGTGCGC
GGCGAAGTCA CGGTCGGCAT GGACGTGATG ATCGACGTCA ATGTAGTATT CCAGGGTAAG
GTGACCATAG GCAATAACGT GACTATCGGC GCCGGCGCCA TCCTCATCGA CTGTGAGATT
GGCGATAACG CCGAGATTAA ACCTTATTCT ATTATCGAAA ATGCGATTGT GGGAGAAGCG
GCCAGTGCAG GGCCATTCGC CCGCCTGCGT CCAGGCGCCG AGCTCAAGCG CGATGCCCAT
ATCGGCAACT TCGTCGAGAT GAAGAAGGCT GTACTGGGTG AAGGCTCTAA GGCGGGTCAC
CTGGCCTATA TTGGCGATGC TCAGGTGGGC GCTGGGGTGA ACATAGGTGC CGGTACCATT
ACCTGTAACT ATGATGGTGC CAACAAGCAC CTGACGGTGA TCGAAGACGA CGTGTTTGTG
GGCAGCGATA CTCAGCTGGT GGCGCCTGTG ACCATAGGTA AGGGGGCCAC ATTAGGTGCG
GGCTCAACCA TTACCCGTGA TGTGGCGGCC GATGAGCTGG TGATCACTCG AGTGAAACAG
CGTCATCTGA CTGGCTGGAC ACGTCCTGTG AAGCAAAAGA AATAA
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| Protein sequence | MALNVVILAA GKGTRMRSDL PKVLHPIAHK SMVQHVIDTA HQLGSEAIQL VYGYGADKLQ
ARLGEQALNW VLQAEQLGTG HAVAQANDNI GDDDTVLILY GDVPLIQVST LEALLAARDA
NGLAILTVNL HDPTGYGRIV REAGKVVGIV EQKDANEEQL KINEINTGIM AAPGKQLKAW
LGQLSSDNAQ GEYYLTDIVA MAHSDGVSIT TAQPESAIEV EGANNRVQLA QLERAYQARA
AEKLMLEGAN LRDPARIDVR GEVTVGMDVM IDVNVVFQGK VTIGNNVTIG AGAILIDCEI
GDNAEIKPYS IIENAIVGEA ASAGPFARLR PGAELKRDAH IGNFVEMKKA VLGEGSKAGH
LAYIGDAQVG AGVNIGAGTI TCNYDGANKH LTVIEDDVFV GSDTQLVAPV TIGKGATLGA
GSTITRDVAA DELVITRVKQ RHLTGWTRPV KQKK
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