| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3804 |
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| Symbol | |
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| ID | 4924158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4527540 |
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| End bp | 4528028 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640165430 |
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| Product | preprotein translocase subunit SecB |
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| Protein accession | YP_001095929 |
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| Protein GI | 127514732 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.903933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.687684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAG CAGTAAATAA CGAACAACAG GGTCCACAGT TCAACATTCA ACGTGTTTAC
ACTAAAGATA TCTCTTTCGA AACGCCAAAC AGCCCAGCTG TTTTCCAGAA AGAGTGGAAC
CCAGAAGTTA AGCTAGACCT AGACACTCGC AGCGCTAAGC TGGCCGACGA CGTATATGAA
GTTGTTCTGT CACTGACTGT TACGGCTAAA AACGGTGAAG AAACAGCTTT CCTATGTGAA
GTTCAACAAG CGGGTATCTT CGCTATCTCT GGTCTGACTG ATCAGCAGCT GGCTCACTCA
CTGGGTGCAT ACTGCCCGAA CGTACTTTTC CCATACGCTC GTGAAGCGGT TGGTAGCCTA
GTTGCTCGTG GTACTTTCCC ACAACTGAAC CTAGCGCCAG TTAACTTCGA CGCCCTGTTC
GCGCAATACG TGCAACAGCG TCAGGCGCAG GCAGAAGCTG CCGGTGAAGC AGCAGAAGCG
AACGCTTAA
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| Protein sequence | MAEAVNNEQQ GPQFNIQRVY TKDISFETPN SPAVFQKEWN PEVKLDLDTR SAKLADDVYE
VVLSLTVTAK NGEETAFLCE VQQAGIFAIS GLTDQQLAHS LGAYCPNVLF PYAREAVGSL
VARGTFPQLN LAPVNFDALF AQYVQQRQAQ AEAAGEAAEA NA
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