| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3803 |
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| Symbol | gpsA |
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| ID | 4924157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4526514 |
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| End bp | 4527533 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165429 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001095928 |
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| Protein GI | 127514731 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.50688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.963603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA CTGCCGATAT AACGGTACTG GGGGCGGGCT CTTATGGCAC CGCCCTTGCT
ATTTCTTTAG CCAGTAACGG ACACAAAACC CTTATTTGGG GCCACGAGCC TGAGCATATC
GAGAATCTGA AAAGGGATCG ATCCAATGAG GCGTTTCTGC CCGGTATCCC GCTGCCGGAT
CTCTTAATTC CCGAAGCCGA CCTTGCAACC GCATTAGCCG CCTCCAACAA TGTGTTGGTG
GTCGTGCCTA GCCATGTGTT TGGTCTTGTG CTCAAGCAGG CTAAGCCGCT GCTGCGCAAA
GATGCCCGCA TCGTCTGGGC GACCAAGGGG CTGGAGCCGG AAACCGGTCG TCTGTTGCAG
GAAGTGGCGC GCGAGATTTT AGGTGACGAG TATCCGCTGG CGGTATTGTC GGGTCCGACC
TTCGCCAAAG AGCTGGCGGC AGGCTTGCCC ACTGCAATCT CCGTTGCCGG TACCGATGAG
GCCTTCACCA ATGACTTGGT GGAGTTGCTG CATAGCCCTA AACGCCTGCG TGTCTACGCC
AACGACGACT TTATCGGTCT GCAACTTGGC GGCGCGGTGA AGAACGTTAT CGCCATCAGC
GCGGGCATGT CAGACGGCAT AGGCTTTGGT GCCAATGCCC GCACAGCATT GATCACCCGT
GGCTTGGTGG AGCTGTCTCG CCTTGGCGAG GCTATCGGCG CTCAACCTTC TACCTTTATG
GGCATGGCGG GTCTTGGCGA CCTGGTGTTG ACTTGTACCG ATAACCAGTC CCGCAACCGT
CGTTTCGGTT TGGCCCTGGG CCAGGGTAAG GATGTCGATA CCGCTCAGGC CGAGATTGGC
CAGGTGGTCG AAGGTTACCG TAACACTAAA GAGGTCTATA CCCTGGCTAA GCGTCTGGGT
GTCGAGATGC CGATCACCGA GCAGGTGTAT AAGGTGCTCT ACCAGGGCGG TACGCCACAC
GAGGCGGCTA AGGCTTTGTT GGCGAGAGAG AAAAAGTCGG AGACGACTGA CAGCGAATAG
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| Protein sequence | MNNTADITVL GAGSYGTALA ISLASNGHKT LIWGHEPEHI ENLKRDRSNE AFLPGIPLPD
LLIPEADLAT ALAASNNVLV VVPSHVFGLV LKQAKPLLRK DARIVWATKG LEPETGRLLQ
EVAREILGDE YPLAVLSGPT FAKELAAGLP TAISVAGTDE AFTNDLVELL HSPKRLRVYA
NDDFIGLQLG GAVKNVIAIS AGMSDGIGFG ANARTALITR GLVELSRLGE AIGAQPSTFM
GMAGLGDLVL TCTDNQSRNR RFGLALGQGK DVDTAQAEIG QVVEGYRNTK EVYTLAKRLG
VEMPITEQVY KVLYQGGTPH EAAKALLARE KKSETTDSE
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