| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3802 |
|---|
| Symbol | |
|---|
| ID | 4924156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 4525075 |
|---|
| End bp | 4526259 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640165428 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095927 |
|---|
| Protein GI | 127514730 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACATC ATGACGTGAT CATTATCGGT GCGGGCGCGG CGGGCCTCAT GTGCGCGGCG
ACGGCGGGCT ATCGCGGCCG AGACGTTCTG GTGTTAGATA ACGGCAAACA GGCGGGGCGC
AAGATCTTAA TCAGTGGCGG TGGCCGCTGT AACTTCACCA ACCAGAAAGT GGAGCCGGCT
AACTTTATCT GCGCCAACCC CCACTTTGTC AAGTCGGCCC TGGCACGATA CTCGTCTCAG
GATTTTATCG AGCTGGTGGA GCGCCACGGC ATCGAGTATC ACCAGCGCGA TCATGGTCAG
CTGTTCTGTA ACGACTCGGC CAAAGAGATA GTCAGCATGC TGCTGACCGA GTGCGAATGG
GCGGGCGCTC AGGTGCAGCT CAGAACAGAT ATTCTTTCTA TCATCAAGCA GGATGACGGC
CTTTTCAGGC TGGAGACCTG CAAGGGTGAA TACAGCTGTG AGTCGCTGGT GGTGGCAACC
GGCGGGCTCT CCATGCCCAA GCTCGGGGCC TCGCCTTTCG GCTATCAGAT TGCCGAGCAG
TTTGGTCTCA ATGTGTTGCC GACTCACGCC GGCCTGGTGC CCTTTACCTG GCACAGCGAG
CAGAAGCAGA AATTTGAGCC GCTCTCTGGT ATTGCGGTGC CCAGTACCAT TACCGCCAAA
GATGGTACCC AGTTTAGCGA GGCGCTGCTG TTTACCCACA GAGGCCTGTC GGGGCCGGCT
ATTTTGCAGA TCTCCAATTA CTGGCAGCCG GGTGAGAGTA TTTCCATCAA CTTGCTGCCC
CAGCTCGACG CCGCCCAGGC ATTGAGTGAG GCCCAGGAGC AGCATCCCAA GCAGAGCCTG
CGCAATACCC TGTCGCAGTG GCTGCCGAAA CGTCTGGTCG AGGTGCTATT TGACGAGGCG
CTGCTCAACA TGGCCCTTAA TCAGCTGGTG CATGCTCAGC GCGATCAGAT AGTAGACAAT
CTCCACAACT GGCAGCTGCT GATGAATGGC ACCGAAGGCT ATCGTACTGC TGAGGTGACC
TTAGGTGGCG TGGATACCAA CGAACTTTCT TCCAAGGATA TGCAGAGCAA GAAGGTGCCC
GGACTCTATT TTGCCGGTGA GGTGATGGAT GTCAGCGGCT GGCTCGGCGG CTTCAACTTC
CAGTGGGCCT GGGCATCGGG TGTCGCCGTC GGTCAGGCTG TGTAG
|
|---|
| Protein sequence | MKHHDVIIIG AGAAGLMCAA TAGYRGRDVL VLDNGKQAGR KILISGGGRC NFTNQKVEPA
NFICANPHFV KSALARYSSQ DFIELVERHG IEYHQRDHGQ LFCNDSAKEI VSMLLTECEW
AGAQVQLRTD ILSIIKQDDG LFRLETCKGE YSCESLVVAT GGLSMPKLGA SPFGYQIAEQ
FGLNVLPTHA GLVPFTWHSE QKQKFEPLSG IAVPSTITAK DGTQFSEALL FTHRGLSGPA
ILQISNYWQP GESISINLLP QLDAAQALSE AQEQHPKQSL RNTLSQWLPK RLVEVLFDEA
LLNMALNQLV HAQRDQIVDN LHNWQLLMNG TEGYRTAEVT LGGVDTNELS SKDMQSKKVP
GLYFAGEVMD VSGWLGGFNF QWAWASGVAV GQAV
|
|---|
| |