Gene Shew_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3786 
Symbol 
ID4924177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4504608 
End bp4504787 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content58% 
IMG OID640165412 
Producthypothetical protein 
Protein accessionYP_001095911 
Protein GI127514714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC GGACACTACA CCTGATGTTG AGCCTGAGTT ACCTGGGCGT GAGCTGGACC 
TTGCTGCTGT GGCTGCACTT TACCACCCAG CCCAATCTCT TCGCCCATTT CATCGCCATC
CCCAGCCTAC TGCTGTTCAG CGCCTACAGC GCCCACCAGA TCATCCGCAA GGGCGTCTGA
 
Protein sequence
MNTRTLHLML SLSYLGVSWT LLLWLHFTTQ PNLFAHFIAI PSLLLFSAYS AHQIIRKGV