| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3779 |
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| Symbol | |
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| ID | 4924199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4498704 |
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| End bp | 4499084 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165405 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001095904 |
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| Protein GI | 127514707 |
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| COG category | [K] Transcription |
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| COG ID | [COG1725] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTAGATT TACTCAATGT CAACCCCAGT AATGGCGATC CCATCTACCG CCAGCTTAGC
GATCAGATAG TGCGTCTGAT CGTCGGCGGC CAGCTGCAAC CTCAAGAGGT GCTACCGTCG
GTGCGGCAGA TCGCCGAGCA CCTGGCGGTC AACCCCATGA CGGTCTCCCG CGCCATTCAG
CAGTTGGTGG AACAGGGTTG GCTCGAGCGT CGCCGCGGCC AACCCACCCG GGTGGCACAG
CGTGGCGACA GCCAGGGTAC TTCGAGTGCC GATCTGATGG CGCCACAAGT CAATTCACTC
ATCAACCAGG CTAAACAGTT AGGCGTTAGT CTGGAGGAAC TCAATGCCAT CATCGCCAAG
GCATGGCAAC AGGCGCAATA A
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| Protein sequence | MLDLLNVNPS NGDPIYRQLS DQIVRLIVGG QLQPQEVLPS VRQIAEHLAV NPMTVSRAIQ
QLVEQGWLER RRGQPTRVAQ RGDSQGTSSA DLMAPQVNSL INQAKQLGVS LEELNAIIAK
AWQQAQ
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