| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3778 |
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| Symbol | |
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| ID | 4924198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4497844 |
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| End bp | 4498695 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165404 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001095903 |
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| Protein GI | 127514706 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGC AAGAGAGCAA TCAAGCCATA TTAGCCTTTC ATGGGCTCAC TAAGGCCTTT
GACGGCCAGC TAGCCATAGA TGACTTGTCG ATGACCCTCT ATCCCGGCAT GGTGGTGGGC
CTGCTGGGGC AAAATGGTGC GGGCAAGTCG ACCCTGATGC GCTGCGCCCT GGGGATCCTC
GATGTCACCG AGGGGCAGAT AGAGATACTG GGCGGCACCA GCGACAATAT CAGCTCGGCG
CAGAAGGAGC TTATCGGCTA TGTGCCTCAG CAACCCTTCG GTTATGAGGG CTTCACCGTC
GAGCGCGCCC TGGCCCTGCA TCGCAGCTTC TATCCTAACT GGGACGGGTC GCTGGAGCAG
GAGTGGTTGA GCCGCTTCCA GCTCGATGGG GCGCAGCAGG TACAGCGCTT GTCTGTGGGG
CAGCGCCAGT CGCTGGCGCT GATCATGGCC ATGGCCTATC GCCCTAAGTT GTTGATCCTC
GATGAGCCGG TTGCCAGCCT GGACCCTATC GCCCGGCGCG AGTTTATGTC GGATCTGTTC
GACCTGGCGC TGGATGCCGG TTCGGCGGTG CTCTTCTCTT CACACATCAC CTCAGATCTC
GAGCGGGTCG CCAGCCATGT GGCCCTGATG CGCAAGGGCA AGCTGGTACT CTTCAAGGAG
ATAGATGCCC TCAGGGAGAG CGTGCAGCTG GTGAGTCTCA AGCCGGGCGA GTCTCTGCCC
GAGGGGCTTG TTGTGCTCAA CCGACAGCAG GATAAGCTGC TGGTGGATCA CTATGAGGCC
GCCATGGCAC CAAGCTTCAC CTCAGTGACG CCAATGAACC TGGAACAACT CTTCATGGAG
CTGCACAGAT GA
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| Protein sequence | MQMQESNQAI LAFHGLTKAF DGQLAIDDLS MTLYPGMVVG LLGQNGAGKS TLMRCALGIL
DVTEGQIEIL GGTSDNISSA QKELIGYVPQ QPFGYEGFTV ERALALHRSF YPNWDGSLEQ
EWLSRFQLDG AQQVQRLSVG QRQSLALIMA MAYRPKLLIL DEPVASLDPI ARREFMSDLF
DLALDAGSAV LFSSHITSDL ERVASHVALM RKGKLVLFKE IDALRESVQL VSLKPGESLP
EGLVVLNRQQ DKLLVDHYEA AMAPSFTSVT PMNLEQLFME LHR
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