| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3771 |
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| Symbol | |
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| ID | 4924191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4491388 |
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| End bp | 4492065 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640165397 |
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| Product | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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| Protein accession | YP_001095896 |
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| Protein GI | 127514699 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4229] Predicted enolase-phosphatase |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.166559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTATTC GAGCCATAGT TGTAGATACA GCGGGTACAA CAACCGATCT GAACTTTATT
CAGGACACCC TTTTTCCCTA TTCGTCTAAG GCCCTCGCTG ATTTTTTAGA AGAGAATCAA
ACTAATGTAT TGGTCGACAA CTGCATCAGC GATGTGAAAG ATATCGCGCT GGAGCCGGAC
GCCTCACTGG AGCGCGTGGT AGAGATACTG CAACAGTGGA TTGCCGAAGA TCGCAAGGCC
ACTCCGCTTA AGACGCTGCA AGGCCTAATC TGGAAACAGG GCTACGCCCA AGGCGAATTT
AAGGGTCACA TCTACCCTGA TTTCATCGAC AGCGTGAAAG AGATTAAGGC GCAGAACGTG
CGTCTCTACA GCTTCTCTTC TGGCTCTGTG GATGCCCAGA AGCTGCTGTT CAGCCACAGC
GACGGCGGCG ACCTGACCGA ATACTTCGAT GGCCACTTCG ACACCCGTAC CGGCAACAAG
CTGTTTAAAC AGGCCTACCT TAACATCATC AACACCATCA GCCTGGCGCC TAAGCAGGTA
CTGTTTATCT CGGATGTGCT CGAGGAGCTC AAAGCTGCCG AGCAGGCGGG CATGCGTGTG
ATGCAGATGG TGCGCGAGAC CACCCAGCGT ACCGGCGACT ACCCGCAGAT CACCAACTTT
AAAGAGTTGA GCTTCTAA
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| Protein sequence | MGIRAIVVDT AGTTTDLNFI QDTLFPYSSK ALADFLEENQ TNVLVDNCIS DVKDIALEPD
ASLERVVEIL QQWIAEDRKA TPLKTLQGLI WKQGYAQGEF KGHIYPDFID SVKEIKAQNV
RLYSFSSGSV DAQKLLFSHS DGGDLTEYFD GHFDTRTGNK LFKQAYLNII NTISLAPKQV
LFISDVLEEL KAAEQAGMRV MQMVRETTQR TGDYPQITNF KELSF
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