Gene Shew_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3749 
Symbol 
ID4920924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4466714 
End bp4467136 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content56% 
IMG OID640165375 
Producthypothetical protein 
Protein accessionYP_001095874 
Protein GI127514677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00135879 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATAAAA AAGGATGGAT TTTACTGCTC CTGCTGCTGG GACTCCCGGT GCAGGCGGTA 
CCGACGGACG ATATCGCCAA TATCCTGCGG GATCAGGAGG CAGCTTGGAA TCGCGGCGAT
CTGGATGCCT ATATGCAAGG CTACTGGCAG AGTGACAAGA TGCGTTTCGT CTCGGGCAAC
AAATTCCGCT ATGGCTGGGC GGAGACGCTG GCGGCCTACA AGAAGAACTA TCCCGATAAG
GCGACCCTGG GGCAGCTCAA GTTCACCATA GAAGAGACCA AGATGCTGAG CAATTATGCC
GCCATCGTCG TGGGCCGCTG GCAGCTGACC CGGGTGAAAG ACAAGCCCAA CGGCGTATTT
ACCCTCTTGG TGGAGAAGAT AGACGACAAG TGGGTGATCA CGCACGATCA CTCGTCGGAT
TAG
 
Protein sequence
MHKKGWILLL LLLGLPVQAV PTDDIANILR DQEAAWNRGD LDAYMQGYWQ SDKMRFVSGN 
KFRYGWAETL AAYKKNYPDK ATLGQLKFTI EETKMLSNYA AIVVGRWQLT RVKDKPNGVF
TLLVEKIDDK WVITHDHSSD