Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3749 |
Symbol | |
ID | 4920924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4466714 |
End bp | 4467136 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640165375 |
Product | hypothetical protein |
Protein accession | YP_001095874 |
Protein GI | 127514677 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00135879 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATAAAA AAGGATGGAT TTTACTGCTC CTGCTGCTGG GACTCCCGGT GCAGGCGGTA CCGACGGACG ATATCGCCAA TATCCTGCGG GATCAGGAGG CAGCTTGGAA TCGCGGCGAT CTGGATGCCT ATATGCAAGG CTACTGGCAG AGTGACAAGA TGCGTTTCGT CTCGGGCAAC AAATTCCGCT ATGGCTGGGC GGAGACGCTG GCGGCCTACA AGAAGAACTA TCCCGATAAG GCGACCCTGG GGCAGCTCAA GTTCACCATA GAAGAGACCA AGATGCTGAG CAATTATGCC GCCATCGTCG TGGGCCGCTG GCAGCTGACC CGGGTGAAAG ACAAGCCCAA CGGCGTATTT ACCCTCTTGG TGGAGAAGAT AGACGACAAG TGGGTGATCA CGCACGATCA CTCGTCGGAT TAG
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Protein sequence | MHKKGWILLL LLLGLPVQAV PTDDIANILR DQEAAWNRGD LDAYMQGYWQ SDKMRFVSGN KFRYGWAETL AAYKKNYPDK ATLGQLKFTI EETKMLSNYA AIVVGRWQLT RVKDKPNGVF TLLVEKIDDK WVITHDHSSD
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