Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3737 |
Symbol | |
ID | 4921031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4450151 |
End bp | 4451125 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640165363 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_001095862 |
Protein GI | 127514665 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00219855 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAACCAC TCAAGATACT CTTTGCGGGT ACACCAGATT TTGCCGCCCG CCATCTACAA GCCTTAATCG ATTCAGAGCA CCAGGTTATC GGAGTTTACT CCCAACCGGA CAGACCCGCG GGCCGTGGTA AGAAACTACA GGCAAGCCCG GTCAAAGCCT TGGCACTCGA GCATGATATC CCGGTCTACC AACCCGTGAG CCTGAGAAAC GAAGATGCCC AGGCAGAGCT CGCCGCTCTC GGCGCCGACA TCATGGTGGT GGTCGCCTAT GGTCTGATCT TGCCTCAGGT AGTACTGGAC ACCCCAAGAC TGGGTTGCAT CAATGTGCAT GGTTCCATCC TGCCTCGCTG GCGTGGCGCA GCGCCGATTC AGCGCGCCCT GTGGGCCGGC GACGCGGCAA CCGGCGTCAC CATAATGCAG ATGGATATAG GTCTGGATAC CGGCGACATG CTGCTCAAGA CCCATCTGCC AATCGAAGAT AGAGACACCT CCGCCAGCCT GTATGAGAAG CTGGCCGAGC AGGGACCAAG CGCCCTGATC CAGGCACTAA AAGGCCTCGC CGAAGGCAGC CTAACGCCTG AGCCACAGGA TGAAGCCCTA GCCAACTACG CCGAGAAGCT CAGCAAAGAG GAGGCGCAGC TCGACTGGCG CAAACCGGCC GAGCAGCTGT GGCGTGAAGT TCGCGCCTTC AACCCTTGGC CCGCGAGCCA CTTCCCCCAT CAGGATGCGG CAATCAAGGT ATGGCAGGCC AGCGTGTCAA TTGAGGCGGC AAAGCAGGCC CCAGGCACCA TCATCCGCGC CGACAAGCAG GGCATAGCGG TCGCCACCGG CGAAGGCGCG CTGGTGCTCG AAACCATTCA GCTGCCGGGC AAGAAGGCCA TGGCGGTGGC CGACGTGCTT AACGCCCGCG GCGACTGGTT TACCCCGGGC ACCCAATTAC AAGGCGTCAC CCCAGCAGAT GAGGCGCAGG CATGA
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Protein sequence | MKPLKILFAG TPDFAARHLQ ALIDSEHQVI GVYSQPDRPA GRGKKLQASP VKALALEHDI PVYQPVSLRN EDAQAELAAL GADIMVVVAY GLILPQVVLD TPRLGCINVH GSILPRWRGA APIQRALWAG DAATGVTIMQ MDIGLDTGDM LLKTHLPIED RDTSASLYEK LAEQGPSALI QALKGLAEGS LTPEPQDEAL ANYAEKLSKE EAQLDWRKPA EQLWREVRAF NPWPASHFPH QDAAIKVWQA SVSIEAAKQA PGTIIRADKQ GIAVATGEGA LVLETIQLPG KKAMAVADVL NARGDWFTPG TQLQGVTPAD EAQA
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