| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3733 |
|---|
| Symbol | |
|---|
| ID | 4921027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 4446824 |
|---|
| End bp | 4447297 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640165359 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095858 |
|---|
| Protein GI | 127514661 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2922] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0219061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00204554 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATA TCCTCATGTA TCTATTCGAA AACTATGTGC ACAGTGAGGT CGAGTTACTG
GTCGATGAAG ACGAGTTGAC CCAAGAACTG ACACGAGCTG GTTTTCATCA ATCGGCGATT
ATCAAGGCCT TGTCCTGGTT AGAACACTTG GCATCGCTAC AAGAAAGTGA TCAACCCTAC
CTATGTAATC ATGATCAACA CTCCTTCCGT ATCTATACTC AGGCCGAGAT GGAGAAGTTA
GATGTCGAGT GTCGTGGTTT CCTGCTCTTC TTAGAACAGA TCAAGGTACT CAATGTCGAG
CTGCGCGAGA TGGTGATCGA TCGCGTGATG GAGCTGGACG AGCCTGCGCT GATCCTGGAA
GACCTTAAGT GGGTGATCCT CATGGTGTTG TTTAATGTGC CGGGCAATGA GTCCGCCTAT
GAGCAGATGG AGGATCTGAT CTTCGAGCAA CCCGATGGTC GGCTACATTC CTAA
|
|---|
| Protein sequence | MFDILMYLFE NYVHSEVELL VDEDELTQEL TRAGFHQSAI IKALSWLEHL ASLQESDQPY
LCNHDQHSFR IYTQAEMEKL DVECRGFLLF LEQIKVLNVE LREMVIDRVM ELDEPALILE
DLKWVILMVL FNVPGNESAY EQMEDLIFEQ PDGRLHS
|
|---|
| |