| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3729 |
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| Symbol | |
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| ID | 4921023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4442665 |
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| End bp | 4443576 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165355 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001095854 |
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| Protein GI | 127514657 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.186137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00821912 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCCTG ATGCCACCCA AGTCAAAGCA TTCTTACTCG ACCTGCAACA AAGGATCTGT
GAAGGCCTGG AACAACTCGA TGGCGAGGCC AAGTTTGTCG CCGACTCCTG GGAGCGGGAA
GAGGGCGGTG GCGGCACCAG CCGTGTATTG ACTAAGGGCA AGGTGTTTGA GCAGGCCGGA
GTAAACTTTT CCCACGTGAC AGGTGCGGCC ATGCCGGCAT CGGCTACCGC TCACAGACCC
GAGCTGGCCG GACGCAGCTT CGAAGCCATG GGCGTCTCGC TGGTGATCCA TCCTAACAAC
CCCTATGTGC CGACGACCCA CGCCAACGTA CGCTTCTTTA TCGCCGAGAA GGAAGGGGCC
GATCCCGTCT GGTGGTTTGG CGGCGGCTTC GATCTGACCC CTTACTATCC GTTTGAAGAG
GATGTGGTGG CCTGGCATCA GAGTGCCAAG GCATTGTGTG AGCCCTTCGG TGAAGACGTT
TACCCTAAAT ATAAGAAATG GTGCGACGAG TATTTCTTCC TGCCACATCG TAACGAGACC
CGTGGTGTCG GCGGCCTCTT CTTCGACGAT CTCAACGAGC CAGGATTCGA AAACAGCTTC
GCCTTCATGC AGGCTGTGGG CGAAGGCTTC TTGAAGGCCT ATGCCCCTAT CGTCGAGAAG
CGTAAAGAGA CGGCATACGG TGAGCGTGAG CGTGATTTCC AGCTCTATCG CCGTGGCCGC
TACGTGGAAT TTAACCTTGT GTATGACAGA GGCACACTAT TTGGCCTGCA GACAGGTGGT
CGTACCGAGT CTATCCTGAT GTCTATGCCG CCGCTGGTGC GCTGGCAGTA TGCCTATACT
CCAGAGGCGG GTAGCCCAGA GGCCAAGCTA TACAGCGATT TTCTCAAGCC GAGAGAGTGG
TTAGAGGCAT AA
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| Protein sequence | MKPDATQVKA FLLDLQQRIC EGLEQLDGEA KFVADSWERE EGGGGTSRVL TKGKVFEQAG
VNFSHVTGAA MPASATAHRP ELAGRSFEAM GVSLVIHPNN PYVPTTHANV RFFIAEKEGA
DPVWWFGGGF DLTPYYPFEE DVVAWHQSAK ALCEPFGEDV YPKYKKWCDE YFFLPHRNET
RGVGGLFFDD LNEPGFENSF AFMQAVGEGF LKAYAPIVEK RKETAYGERE RDFQLYRRGR
YVEFNLVYDR GTLFGLQTGG RTESILMSMP PLVRWQYAYT PEAGSPEAKL YSDFLKPREW
LEA
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