Gene Shew_3711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3711 
Symbol 
ID4921223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4416054 
End bp4416359 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content54% 
IMG OID640165333 
Productrhodanese domain-containing protein 
Protein accessionYP_001095836 
Protein GI127514639 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00389658 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTT TTCAACACCT GAGTGTCAAT CAACTCATCC ATATGCTGGA AGACAATACC 
GAGGTACAGG TAGTCGATAT CCGCGACGGC GCCAGCTTCG AGGCGGGACA GATCCCCGGC
TCGACCAACC TCAACAACGA AAACCTGGCG CGTTATATTG CCGAGGCCGA CATGGACAGC
CCCTTAGTCG TGGTCTGCTA TCACGGCATC AGCAGCCAAA ATGCCGCGCA ATATCTGCAT
GAACAGGGTT TCGATGATGT CTATAGCCTG GATGGTGGCT TCCAGGCTTG GCGCGAAGCC
CATTAA
 
Protein sequence
MSAFQHLSVN QLIHMLEDNT EVQVVDIRDG ASFEAGQIPG STNLNNENLA RYIAEADMDS 
PLVVVCYHGI SSQNAAQYLH EQGFDDVYSL DGGFQAWREA H