Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3711 |
Symbol | |
ID | 4921223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4416054 |
End bp | 4416359 |
Gene Length | 306 bp |
Protein Length | 101 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640165333 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001095836 |
Protein GI | 127514639 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00389658 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTT TTCAACACCT GAGTGTCAAT CAACTCATCC ATATGCTGGA AGACAATACC GAGGTACAGG TAGTCGATAT CCGCGACGGC GCCAGCTTCG AGGCGGGACA GATCCCCGGC TCGACCAACC TCAACAACGA AAACCTGGCG CGTTATATTG CCGAGGCCGA CATGGACAGC CCCTTAGTCG TGGTCTGCTA TCACGGCATC AGCAGCCAAA ATGCCGCGCA ATATCTGCAT GAACAGGGTT TCGATGATGT CTATAGCCTG GATGGTGGCT TCCAGGCTTG GCGCGAAGCC CATTAA
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Protein sequence | MSAFQHLSVN QLIHMLEDNT EVQVVDIRDG ASFEAGQIPG STNLNNENLA RYIAEADMDS PLVVVCYHGI SSQNAAQYLH EQGFDDVYSL DGGFQAWREA H
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