Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3709 |
Symbol | |
ID | 4921221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4413736 |
End bp | 4414929 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640165331 |
Product | 2-amino-3-ketobutyrate coenzyme A ligase |
Protein accession | YP_001095834 |
Protein GI | 127514637 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase [TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.556629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAACGA CCTCATTCTA CGATCAAATC AATCAGCAGC TGGCTGAAGT TAAAGCGGAA GGCTTATACA AGAGCGAGCG CGTTATTGCC TCTCCTCAGA AGACTGAAAT CGAAGTCAAC GGCCACGAAG TGATGAACTT CTGCGCCAAC AACTACCTTG GCCTGGCAAA TCATCCCGAG CTGATCACCG CGGCGCAGCA GGGCCTGAGC GATCACGGCT TCGGCATGGC GTCTGTGCGC TTCATCTGTG GTACCCAAGA TATTCATAAA CAACTCGAAG CCAGCCTGAG CGAATTCCTC GGCATGGAAG ACACTATTCT TTACTCTTCT TGCTTCGATG CGAACGCCGG TCTGTTCGAG ACCCTGCTGG ACGCCGAAGA CGCCATCGTC TCAGATGCCC TGAACCATGC CTCTATCATC GACGGTGTAC GTCTGTGTAA GGCCAAGCGT TTCCGCTATG CCAACAACGA CATGGCCGAT CTGGAGACCC AACTGCAGGC GGCAAAGGCA GCCGGTGCCC GTCATATCTT GATCGCCACC GACGGTGTGT TCTCAATGGA TGGCGTGATC GCCAACCTCA AAGGCGTCTG CGATCTAGCC GATAAATATG GCGCCCTGGT CATGGTGGAT GACTCTCACG CCGTGGGCTT TATCGGTCAA AACGGCCGCG GTACCCACGA GTATTGCGAC GTGATGGACA GAGTCGACAT CATCACGGGC ACCCTGGGCA AGGCCCTGGG CGGCGCATCG GGTGGATTCA CCTCGGCGAA GAAAGAGGTC GTCGACTGGC TACGTCAACG CTCGCGTCCT TACCTCTTCT CTAACTCGCT GGCCCCTTCT ATCGTCACCG CCTCGATTCA CGTGCTGGAG ATGCTAAAGT CAGGCCAGGC ACTGCGCGAA GCCGTATGGG AAAACAGCCG TTACTTCCGC GAGAAGATGA CTGCGGCAGG CTTTACCCTG GGCGGCGCCG ACCACGCCAT CATCCCTGTG ATGATTGGCG ATGCCAAGCT GGCCAGCGAC TTTGCTAACC GTCTGTTGGA AGAGAACATC TATGTGATCG GCTTCTCCTT CCCTGTGGTA CCTAAGGGCC AGGCCCGTAT TCGTACGCAG ATGTCGGCCG CTCATACCCG CGAGCAGCTA GATCGCGCCA TCGATGCCTT CACCCGCATC GCCAAAGAGA TGGGAATTAT CTAG
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Protein sequence | MATTSFYDQI NQQLAEVKAE GLYKSERVIA SPQKTEIEVN GHEVMNFCAN NYLGLANHPE LITAAQQGLS DHGFGMASVR FICGTQDIHK QLEASLSEFL GMEDTILYSS CFDANAGLFE TLLDAEDAIV SDALNHASII DGVRLCKAKR FRYANNDMAD LETQLQAAKA AGARHILIAT DGVFSMDGVI ANLKGVCDLA DKYGALVMVD DSHAVGFIGQ NGRGTHEYCD VMDRVDIITG TLGKALGGAS GGFTSAKKEV VDWLRQRSRP YLFSNSLAPS IVTASIHVLE MLKSGQALRE AVWENSRYFR EKMTAAGFTL GGADHAIIPV MIGDAKLASD FANRLLEENI YVIGFSFPVV PKGQARIRTQ MSAAHTREQL DRAIDAFTRI AKEMGII
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