| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3707 |
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| Symbol | |
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| ID | 4921219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4411115 |
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| End bp | 4412380 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165329 |
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| Product | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein |
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| Protein accession | YP_001095832 |
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| Protein GI | 127514635 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0792619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTA CCCTCTATTC TGCCTTGCTG TATCTGCTAA GCCCTCTGCT GATTCTCTAT
CTGGCGATTA GGGCGATCAA GAGCCCGGAT TATCGTGGCC GCTGGGGTGA ACGCTTCGGT
CTGTCGACGC TGTCGCGGGC GGATTTGTTG ATCCATTCTG TCTCCATGGG GGAGACTCTG
GCGGCGATTC CGCTGATTAA ACAGATACAG GCGGCCTACC CTGAGCTCAG TATTACCATA
ACCACCACGA GTCCGACAGG TTCGGCCGAG GTGATAAAGG CTTTTGCGGG CAGCGTGCAG
CACTGCTATC TGCCCTTCGA CCTTCCTCTG TGTGTGGCGC GTTTCCTGAG CCAGCTGCAG
CCAAAGCAGA TCATCATCAT GGAGACTGAG CTGTGGCCGA ACCTCATTCA TCAGGCCAAA
CGCCGGGGTA TTAGGCTGAT GCTGGCCAAC GCCCGCCTGT CGGAGAAGTC CGCCAACCAG
TATCGCGGGC GACCCAAGCT GTCGCTGCCC ATGTTGCGCT CACTGGATCT GATCGCCGCC
CAGTCGCCTC AGGCGGCGCA GCGTTTCATC GACCTGGGCG TCGAGGCCGA GCCGGTAAAG
GTCACGGGAA GCCTCAAGTT CGACCTCACT ATAGCGCCAG ACTTGCTAGA GAAGGCAAAA
GAGCTGCGTA AGACTTGGCA GCGGATGGAG ACTCCGGTCT GGGTGGCGGG CAGCGTGCAT
CCGGGGGAGT TTGATATCAT GCTCGCCGCG CACAAGAGCC TGTTGATACG CTTCCCCCAT
GCCCTGCTGG TGTTGGTGCC CAGGCATCCA GAGCAGTTTG ACGCGGCGGC CAGCCGGGTG
AAGGCCGCAG GGCTAGTGCT GGCGCGCCGC AGTAAACAAG ATGCGGTGGA TGACCAGACT
CAGGTGCTGC TGGGCGACAC CATGGGTGAG CTGCTCAGCT TCTATGGCGC GGCGGATCAG
GCTTTTGTCG GCGGTACCCT GATCGAGAAT GGTGGCCATA ATCCACTGGA GCCGGCGGCT
ATCGGCCTGC CCGTCTATGT GGGGCCACAT CACTGGGATT TTGCCGAGAT CACTGGCCTG
CTCAAGGAGG CGGGATCTTT AGCCTTAGTG CAAGATGCCG ATGAGTTGGC GCAGCAGCTG
GTGCATAAGT TTGACGATAA GGCGGCCTAT CTGGTCGCCA GAGAGGCCGG GCTCGAGGTG
GTTGAGGCCA ATAAGGGGGC ACTTGCGGCC CAGTTTGCCT TGGCTAACGA GTTGATTAAG
GCTTAG
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| Protein sequence | MNRTLYSALL YLLSPLLILY LAIRAIKSPD YRGRWGERFG LSTLSRADLL IHSVSMGETL
AAIPLIKQIQ AAYPELSITI TTTSPTGSAE VIKAFAGSVQ HCYLPFDLPL CVARFLSQLQ
PKQIIIMETE LWPNLIHQAK RRGIRLMLAN ARLSEKSANQ YRGRPKLSLP MLRSLDLIAA
QSPQAAQRFI DLGVEAEPVK VTGSLKFDLT IAPDLLEKAK ELRKTWQRME TPVWVAGSVH
PGEFDIMLAA HKSLLIRFPH ALLVLVPRHP EQFDAAASRV KAAGLVLARR SKQDAVDDQT
QVLLGDTMGE LLSFYGAADQ AFVGGTLIEN GGHNPLEPAA IGLPVYVGPH HWDFAEITGL
LKEAGSLALV QDADELAQQL VHKFDDKAAY LVAREAGLEV VEANKGALAA QFALANELIK
A
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