Gene Shew_3695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3695 
Symbol 
ID4921619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4399371 
End bp4399763 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content53% 
IMG OID640165317 
Productcytidyltransferase-like protein 
Protein accessionYP_001095820 
Protein GI127514623 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0615] Cytidylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR01518] glycerol-3-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTA TTACTTTCGG GACCTTCGAT ATGTTTCATA TCGGACACCT CAACATTATC 
GAGCGCGCCA GAGAGTTAGG GGAACACCTG ACGGTGGGCG TTTCCTCGGA TGCGCTGAAT
TTCTCCAAGA AACAGCGCTA CCCCATCTGT AACGAACGCG ACAGAATGCG CATCGTCAAG
GCGCTCGCCT GTGTCGACGA GGTATTTTTG GAGGAATCGC TGGAGTTAAA GGCGGAATAT
ATCGAGGCGC ATCAGGCCGA TATCCTGGTG ATGGGCGATG ACTGGCAAGG CAAGTTCGAC
CATCTCAAGC CTCTGTGCCA GGTGATCTAT CTACCGCGAA CACCGGCCAT CTCGACGACC
CAGCTGATCG AGGTCGTGCG GGAGATAAGA TAA
 
Protein sequence
MRIITFGTFD MFHIGHLNII ERARELGEHL TVGVSSDALN FSKKQRYPIC NERDRMRIVK 
ALACVDEVFL EESLELKAEY IEAHQADILV MGDDWQGKFD HLKPLCQVIY LPRTPAISTT
QLIEVVREIR