| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3694 |
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| Symbol | |
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| ID | 4921618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4398356 |
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| End bp | 4399309 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640165316 |
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| Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
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| Protein accession | YP_001095819 |
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| Protein GI | 127514622 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATAG TAACGGGTGC TGCCGGCTTT ATCGGTAGCA ACTTAGTTAA AGCGCTCAAT
AATTTAGGGC GTAGTGACAT TATCGCCGTA GACGACCTGA CCGACGGCAC CAAGATGTTT
AACCTGGCCG ACTGTGAAAT TGCCGACTAT CTGGATAAAG CCGACTTCAT CGAGCAGATC
GCCCAGGGTC AGTTCGATGG CAAGGTCGAA GTGATCTTCC ATCAGGGTGC CTGCTCGTCG
ACCACAGAGT GGGACGGCAA GTTCATGATG GCCAACAACT ACGAGTATTC CAAGACACTG
CTCCACTTCT GCGAGCGTAA CGGCAGCCAG TTTATCTACG CCTCATCGGC TTCTGTCTAT
GGCGGCAGCG ATAAGTTTAT CGAGCAGCGG GAACTGGAGA AGCCTCTCAA CGTCTACGCC
TACTCCAAGT TCCTGTTCGA CCAATATGTC AGACAGCACA ACTTCACCAC TCAGGTGGCG
GGCCTACGTT ACTTCAACGT CTATGGCCCT AGGGAGCAAC ACAAGGGCGG CATGGCCAGC
GTGGCCTTCC ACTTCAACAA CCAGATCAAG GCAAGCGGCA TCTGTCGCCT GTTCCAGGGC
CACGACGGCT TCGAAGATGG CAAGCAGCTA AGAGACTTCG TGTACGTGGA AGATGTGGTC
AAGGTCAACC TCTGGCTTTG GCAAAACCCA GGGATCTCAG GAGTATACAA CTGTGGTACG
GGTCAGGCAC AGAGCTTCAA CGACGTGGCC AATGCGGTGA TCGCCTATCA TGGTAAGGGA
GAAATTGAAT ATATTCCCTT CCCGGATAAG CTCAAGGGCG CCTATCAGAG CTATACCCAG
GCCGACCTCA CGCAGCTTAG AGCAGCAGGA TATACCCAGG CCTTTAAGAC GGTCGAAGAG
GGGGTTCCCG AATATCTGGA CTGGCTGGCC GCGCAGCACT TTATCGGTCA GTAG
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| Protein sequence | MIIVTGAAGF IGSNLVKALN NLGRSDIIAV DDLTDGTKMF NLADCEIADY LDKADFIEQI
AQGQFDGKVE VIFHQGACSS TTEWDGKFMM ANNYEYSKTL LHFCERNGSQ FIYASSASVY
GGSDKFIEQR ELEKPLNVYA YSKFLFDQYV RQHNFTTQVA GLRYFNVYGP REQHKGGMAS
VAFHFNNQIK ASGICRLFQG HDGFEDGKQL RDFVYVEDVV KVNLWLWQNP GISGVYNCGT
GQAQSFNDVA NAVIAYHGKG EIEYIPFPDK LKGAYQSYTQ ADLTQLRAAG YTQAFKTVEE
GVPEYLDWLA AQHFIGQ
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