| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3690 |
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| Symbol | |
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| ID | 4921614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4394035 |
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| End bp | 4394850 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165312 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001095815 |
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| Protein GI | 127514618 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAC TCCCAGAAGT CGAAGTGACC CGCCAAGGGA TCTCCCCTCA CCTGCTGGAT
CAGCAGGTCA CAGGATTAAC CGTGCGTAAC GCCTCCCTGC GATGGCCCGT CCCCGAAGTT
GCCCAGCAGA TTGTCGGACA GACCATCAGA GGCATACGCC GCCGCGCCAA ATATCTGCTG
CTGGATACCG ATGCCGGCAC CACCATAGTC CACCTCGGCA TGTCGGGCAG CCTGCGAATT
CTGCCCAAGT CTACGCCGGT GGAGAAGCAT GACCATATCG ATTTGGAACT GGCCAGCGGC
AAGGTGCTCA GGTTTAACGA TCCCAGACGC TTCGGCGCCT GGCTCTGGTG CGAGCTCCCC
GAAGCCGCCC ATCCCCTGCT GGCCAAACTA GGCCCAGAAC CCCTGCAATC GGGCTTCAAT
GTCGACTACT TGGCCAAGGC ACTGGAAGGT AAGAAGAAGG CGGTCAAACT CTGCCTGATG
GACAATCATA TCGTGGTGGG CGTAGGGAAT ATCTATGCCA ACGAGGCCCT GTTTGCCGCC
GGCATACACC CACAGACCGA GGCGGGACGA ATCGATAGGG AGCGGCTTAC CGTGCTGGTT
GCCGAGGTGA AACAGATCTT GGCCCAGGCG ATCAAACAGG GCGGTACTAC GCTCAAAGAC
TTCACCAACG CCGATGGCAA ACCCGGTTAT TTCGCCCAGA AGCTACATGT CTATGGCCGC
GGCGGCGAGA CCTGTACTCA ATGTGGCAAC CTGCTGAGCG AGATAAAACT GGGCCAAAGG
GCCACAGTCT TCTGCGGCCT GTGTCAGCCA CGTTAA
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| Protein sequence | MPELPEVEVT RQGISPHLLD QQVTGLTVRN ASLRWPVPEV AQQIVGQTIR GIRRRAKYLL
LDTDAGTTIV HLGMSGSLRI LPKSTPVEKH DHIDLELASG KVLRFNDPRR FGAWLWCELP
EAAHPLLAKL GPEPLQSGFN VDYLAKALEG KKKAVKLCLM DNHIVVGVGN IYANEALFAA
GIHPQTEAGR IDRERLTVLV AEVKQILAQA IKQGGTTLKD FTNADGKPGY FAQKLHVYGR
GGETCTQCGN LLSEIKLGQR ATVFCGLCQP R
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