| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3650 |
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| Symbol | |
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| ID | 4922184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4351052 |
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| End bp | 4351783 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165272 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001095775 |
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| Protein GI | 127514578 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAGCC GTGCTCGTCT TGCGCCTCAT TTTGTTCAAA AGCTGCTATG CCTCTGGTGC
GGCCTGGCAC TGTGTCTGCC TTTAGGTGCC ACCGAGCAGG CACAGAAGCC GCGCTACAAG
GCGAGCTATT CTAAGCATGG CATCTTAAGC AACGGCGATG CCCCGCGCCT GGATGAGACC
GACGACAGCA AGATCAAGGT TTATCAATAT ACCCAGGCCA ACGGCGTGGT GGCCTTTGCC
GACCATGCCC CGGGCGACAG CGAGTTCAGG GTCTTGTTAT ATGAGTGCTA CGCCTGCAAA
CCAGACTCAG ATCTCGACTG GCAGAAGATG CCGCTGTTTA GCGCCGAATA TGATGAGTTG
ATCTCACGGG CCGCCAAGAC CCATGGGCTG GACCCTGCAC TTATCCGCGC CGTGATCCAT
GCCGAATCCG CCTTCAACGT ATTTGCCCTG TCACGCAGCG GTGCAATGGG CTTGATGCAG
CTGATGCCGG GTACCGCCAA GGCGATGGGG GTGAAGAACC CTTACCGGCC CGAGCAGAAT
ATCGACGGCG GCGCCCGCTA TCTGGCCAAG ATGCTGGCAA GGTTCGACGG CAATATCGAT
CTGGCTTGCG CCGCCTATAA CGCCGGCCCC ACCACAGTGA CTCAGTACAA GGGGATCCCG
CCCTATCCGG AGACCCAGGC CTATGTAAAA CGGGTCAAGA TACTGCTGAA ACGCTATCAG
AAGCTGGGGT AG
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| Protein sequence | MPSRARLAPH FVQKLLCLWC GLALCLPLGA TEQAQKPRYK ASYSKHGILS NGDAPRLDET
DDSKIKVYQY TQANGVVAFA DHAPGDSEFR VLLYECYACK PDSDLDWQKM PLFSAEYDEL
ISRAAKTHGL DPALIRAVIH AESAFNVFAL SRSGAMGLMQ LMPGTAKAMG VKNPYRPEQN
IDGGARYLAK MLARFDGNID LACAAYNAGP TTVTQYKGIP PYPETQAYVK RVKILLKRYQ
KLG
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