| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3612 |
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| Symbol | |
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| ID | 4922398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4309788 |
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| End bp | 4310786 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165234 |
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| Product | general secretion pathway protein K |
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| Protein accession | YP_001095737 |
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| Protein GI | 127514540 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3156] Type II secretory pathway, component PulK |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGCT TGCCAGGAAA GCAGCGTGGG GTCGCGCTGA TCGTCGTCTT GTTGATCGTG
GCCATGATCG CCATCATAGC CACCAACATC AACAGCCGTA ACCAGATCTC TGTGCGCCGT
ACCATTAACC TGGCGCAGTA CGATCAGGCC TATTGGTATG CGATCTCGGC CGAAGAGCTG
GCCAAGAAGG TGTTGAAACA AGATTTGGAC GATGCCGATG AGGGCAAGGT GCATCGTCAG
CAATATTGGG CCCAGGCCGA TGTGGTGTTT CCCGCCGAGC AGGGTGAGAT AGGCGGTCGT
ATCAGCGATC TGCAGGCCTG TTTTAACCTA AACGCTCTGG CGATCGAGAC CACAGAGGTG
GAAAACGGCC AGCCCAAGCT GCCGCTGCCG GCGGTACAAT TTAAGGGGCT GTTGGTGGCG
CTGGGGATGG ATGACTTCTC CGCCGAGCGT CTGACCCATA CGCTGAAAGA TTATATCGAT
GAGGATACGG TCGCCAGCCC GTTCGGCGCC GAAGATGCTG ACTATGAGTC GCGCACCGTG
CCTTACCGGG CGGCTAACAC CCTGATGAGC CATCGCAGCG AGCTGCGGGC GGTGATCGGC
TTCAGCCAGG AGGTCTACCT CAAGTTGGCG CCTTATATCT GCGTCATACC CGGCTATGAC
CGCCAGGTGC TGAACGTCAA CACCATAGAG GTGGAGCAGG CGGCGCTGCT GGCGGGCATG
TTTGATAATA AGATCAGCGT GGGCGAGGCC GAAAGCATCA TCAATCAGCG CCCGGGTGAC
GGCTATGACA GCCTGGATGA CTTCTGGTCT AATGGTTCTA TCTCAGGGCT GCGCCAGGAC
AAAAATCTGG AATCGAGCTT TAGCCTCAAG AGTCAGTATT TTCTGCTGGA GGCGGGCGCT
AAGGTTGATA GCGCCACCTT TAGGATGCAA AGTGTATTAC GTGTGGGCGG TAACAACCAG
CTGGACGTCT TGACCCGTCA ATATGGCGGC CAAAAATAA
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| Protein sequence | MNSLPGKQRG VALIVVLLIV AMIAIIATNI NSRNQISVRR TINLAQYDQA YWYAISAEEL
AKKVLKQDLD DADEGKVHRQ QYWAQADVVF PAEQGEIGGR ISDLQACFNL NALAIETTEV
ENGQPKLPLP AVQFKGLLVA LGMDDFSAER LTHTLKDYID EDTVASPFGA EDADYESRTV
PYRAANTLMS HRSELRAVIG FSQEVYLKLA PYICVIPGYD RQVLNVNTIE VEQAALLAGM
FDNKISVGEA ESIINQRPGD GYDSLDDFWS NGSISGLRQD KNLESSFSLK SQYFLLEAGA
KVDSATFRMQ SVLRVGGNNQ LDVLTRQYGG QK
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